RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
FBXO28-204ENST00000519894 HES2Q9Y543 173 aa16.54■□□□□ 0.24
FBXO28-204ENST00000519894 A0A1B0GUA9 196 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 HIDE1A8MVS5 230 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 MBTPS2O43462 519 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 EYA4O95677 639 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 NDUFV1P49821 464 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 RNASELQ05823 741 aaKnown RBP16.53■□□□□ 0.24
FBXO28-204ENST00000519894 FAM187BQ17R55 369 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 ZBTB8OSQ8IWT0 167 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 IGSF21Q96ID5 467 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 GBP3Q9H0R5 595 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 NGRNQ9NPE2 291 aaKnown RBP16.53■□□□□ 0.24
FBXO28-204ENST00000519894 UBN1Q9NPG3 1134 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 ENTPD7Q9NQZ7 604 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 PRMT7Q9NVM4 692 aaPredicted RBP16.53■□□□□ 0.24
FBXO28-204ENST00000519894 MIOSQ9NXC5 875 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
FBXO28-204ENST00000519894 XIRP2A4UGR9 3374 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 POMCP01189 267 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 NAMPTP43490 491 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 SLC11A1P49279 550 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.24
FBXO28-204ENST00000519894 KCNC3Q14003 757 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 TMC7Q7Z402 723 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 KCNK18Q7Z418 384 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 VN1R2Q8NFZ6 395 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 BCL7CQ8WUZ0 217 aaPredicted RBP16.52■□□□□ 0.24
FBXO28-204ENST00000519894 TMEM169Q96HH4 297 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 PNMA5Q96PV4 448 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 GAD1Q99259 594 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 CDCA3Q99618 268 aaPredicted RBP16.52■□□□□ 0.24
FBXO28-204ENST00000519894 C2orf40Q9H1Z8 148 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 CD207Q9UJ71 328 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
FBXO28-204ENST00000519894 CARNS1A5YM72 827 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 INPPL1O15357 1258 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 NPTXRO95502 500 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 EDN1P05305 212 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 PPP2R5AQ15172 486 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 HYIQ5T013 277 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 ARL6IP4Q66PJ3 421 aaKnown RBP16.51■□□□□ 0.23
FBXO28-204ENST00000519894 SLC27A1Q6PCB7 646 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 KIFAP3Q92845 792 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 FAM193BQ96PV7 902 aaPredicted RBP16.51■□□□□ 0.23
FBXO28-204ENST00000519894 TMEM175Q9BSA9 504 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 APOL6Q9BWW8 343 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 CCDC113Q9H0I3 377 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 NXF3Q9H4D5 531 aaKnown RBP16.51■□□□□ 0.23
FBXO28-204ENST00000519894 BARX2Q9UMQ3 279 aaPredicted RBP16.51■□□□□ 0.23
FBXO28-204ENST00000519894 USP20Q9Y2K6 914 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 GIT1Q9Y2X7 761 aa16.51■□□□□ 0.23
FBXO28-204ENST00000519894 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 ARL5CA6NH57 179 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 ALDH2P05091 517 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 PRKCBP05771 671 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 AKAP5P24588 427 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 MLH1P40692 756 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 COASYQ13057 564 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 SMAD4Q13485 552 aaKnown RBP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 SMAD2Q15796 467 aaKnown RBP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 MAPK6Q16659 721 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 RINT1Q6NUQ1 792 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 TMEM184AQ6ZMB5 413 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 C1orf186Q6ZWK4 172 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 DDX53Q86TM3 631 aaKnown RBP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 DAW1Q8N136 415 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 VPS52Q8N1B4 723 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 MRPL43Q8N983 215 aaKnown RBP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 DEPTORQ8TB45 409 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 IFT74Q96LB3 600 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 KIFC3Q9BVG8 833 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 RUSC1Q9BVN2 902 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 TRIM6Q9C030 488 aaPredicted RBP16.5■□□□□ 0.23
FBXO28-204ENST00000519894 ZBP1Q9H171 429 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 FAM50BQ9Y247 325 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 CUL9Q8IWT3 2517 aa16.5■□□□□ 0.23
FBXO28-204ENST00000519894 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
FBXO28-204ENST00000519894 ACKR2O00590 384 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 NRP1O14786 923 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 CXCL14O95715 111 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 CTSAP10619 480 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 SCNN1GP51170 649 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 PRPF4BQ13523 1007 aaKnown RBP16.49■□□□□ 0.23
FBXO28-204ENST00000519894 ZRSR1Q15695 479 aaKnown RBP16.49■□□□□ 0.23
FBXO28-204ENST00000519894 GJD3Q8N144 294 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 SMRP1Q8NCR6 262 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 GSTCDQ8NEC7 633 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 ZFP42Q96MM3 310 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 PLIN2Q99541 437 aa16.49■□□□□ 0.23
FBXO28-204ENST00000519894 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms