RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 GAP43P17677 238 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 LAG3P18627 525 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 POU5F1Q01860 360 aaKnown RBP12.69□□□□□ -0.38
SPIDR-212ENST00000519661 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 DSC1Q08554 894 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 DCAF4L1Q3SXM0 396 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 XKR4Q5GH76 650 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 FAM117BQ6P1L5 589 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 GLB1LQ6UWU2 654 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 MAEAQ7L5Y9 396 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 MAP4K3Q8IVH8 894 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 DDX12PQ92771 950 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 PLIN2Q99541 437 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 ACO2Q99798 780 aaKnown RBP12.69□□□□□ -0.38
SPIDR-212ENST00000519661 EIF2AQ9BY44 585 aaKnown RBP12.69□□□□□ -0.38
SPIDR-212ENST00000519661 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 PRDM12Q9H4Q4 367 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 KMT5AQ9NQR1 393 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 KANSL3Q9P2N6 904 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 MTCH2Q9Y6C9 303 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
SPIDR-212ENST00000519661 MEIS3P2A8K0S8 358 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 TRAK2O60296 914 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 TOM1L1O75674 476 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 MYL1P05976 194 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 PPM1AP35813 382 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 STAT6P42226 847 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 ME1P48163 572 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 GATMP50440 423 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 CAMK1Q14012 370 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 ZRSR1Q15695 479 aaKnown RBP12.68□□□□□ -0.38
SPIDR-212ENST00000519661 NOMO2Q5JPE7 1267 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 HAUS6Q7Z4H7 955 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 HACE1Q8IYU2 909 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 MYLIPQ8WY64 445 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
SPIDR-212ENST00000519661 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 GAS2L1Q99501 681 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-212ENST00000519661 C7orf25Q9BPX7 421 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
SPIDR-212ENST00000519661 TRIM9Q9C026 710 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 RSAD1Q9HA92 442 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
SPIDR-212ENST00000519661 TBC1D13Q9NVG8 400 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
SPIDR-212ENST00000519661 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-212ENST00000519661 PRUNE2Q8WUY3 3088 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 TBKBP1A7MCY6 615 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 FAM189A1O60320 539 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 SSBP05455 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPIDR-212ENST00000519661 ADRB2P07550 413 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 SLFN14P0C7P3 912 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 MCF2P10911 925 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 FOSL2P15408 326 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 MCL1Q07820 350 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 ALCAMQ13740 583 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-212ENST00000519661 ALKAL1Q6UXT8 129 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 ZNF720Q7Z2F6 126 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 APBB1IPQ7Z5R6 666 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-212ENST00000519661 GPR65Q8IYL9 337 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 TMEM174Q8WUU8 243 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-212ENST00000519661 ARNTL2Q8WYA1 636 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 CPB2Q96IY4 423 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 TMEM175Q9BSA9 504 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 NXF3Q9H4D5 531 aaKnown RBP12.67□□□□□ -0.38
SPIDR-212ENST00000519661 AAASQ9NRG9 546 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
SPIDR-212ENST00000519661 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 PVALEFA0A1B0GWK0 134 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 ARL5CA6NH57 179 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 CCDC169A6NNP5 214 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 SFI1A8K8P3 1242 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 SLC16A4O15374 487 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
SPIDR-212ENST00000519661 TBCAO75347 108 aaKnown RBP12.66□□□□□ -0.38
SPIDR-212ENST00000519661 FAM13AO94988 1023 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 ITGB1P05556 798 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 ITGA4P13612 1032 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 GRM5P41594 1212 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 AMPD3Q01432 767 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 NAB2Q15742 525 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 EEF1DP3Q658K8 133 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 PDE12Q6L8Q7 609 aaKnown RBP12.66□□□□□ -0.38
SPIDR-212ENST00000519661 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 CLEC17AQ6ZS10 378 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-212ENST00000519661 ABI1Q8IZP0 508 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 SLC39A11Q8N1S5 342 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms