RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 PDZD7Q9H5P4 517 aa17.25■□□□□ 0.35
C8orf88-201ENST00000517562 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
C8orf88-201ENST00000517562 C17orf75Q9HAS0 396 aa17.25■□□□□ 0.35
C8orf88-201ENST00000517562 SLC28A3Q9HAS3 691 aa17.25■□□□□ 0.35
C8orf88-201ENST00000517562 TMEM161AQ9NX61 479 aa17.25■□□□□ 0.35
C8orf88-201ENST00000517562 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
C8orf88-201ENST00000517562 LINC01553A4QN01 128 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 MYBP10242 640 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 HARSP12081 509 aaKnown RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 AKAP5P24588 427 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 AMPD3Q01432 767 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 TAP1Q03518 808 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 KCNA1Q09470 495 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 COASYQ13057 564 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 SEZ6Q53EL9 994 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 ATF7IP2Q5U623 682 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 AGMOQ6ZNB7 445 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 KRBA2Q6ZNG9 492 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 ERCC4Q92889 916 aaPredicted RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 ZNF689Q96CS4 500 aaPredicted RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 ACO2Q99798 780 aaKnown RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 SEMA6BQ9H3T3 888 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 NXF3Q9H4D5 531 aaKnown RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 MRPL44Q9H9J2 332 aaKnown RBP17.24■□□□□ 0.35
C8orf88-201ENST00000517562 KLK14Q9P0G3 267 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 INPP5FQ9Y2H2 1132 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 IPPQ9Y573 584 aa17.24■□□□□ 0.35
C8orf88-201ENST00000517562 CNTNAP2Q9UHC6 1331 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 TDRD15B5MCY1 1934 aaKnown RBP17.23■□□□□ 0.35
C8orf88-201ENST00000517562 TISP43B9A030 160 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 NR1I2O75469 434 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 AXLP30530 894 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 OSTNP61366 133 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 STRN3Q13033 797 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
C8orf88-201ENST00000517562 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
C8orf88-201ENST00000517562 PPP2R2DQ66LE6 453 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 LRRC55Q6ZSA7 311 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 ZNF720Q7Z2F6 126 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 CCDC65Q8IXS2 484 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 CNNM3Q8NE01 707 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 CASD1Q96PB1 797 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 C17orf80Q9BSJ5 609 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 TCHPQ9BT92 498 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 MRPL4Q9BYD3 311 aaKnown RBP17.23■□□□□ 0.35
C8orf88-201ENST00000517562 ZNF576Q9H609 170 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 MIOSQ9NXC5 875 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 TBX20Q9UMR3 447 aa17.23■□□□□ 0.35
C8orf88-201ENST00000517562 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
C8orf88-201ENST00000517562 PHLPP2Q6ZVD8 1323 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 CITO14578 2027 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 EPOPA6NHQ4 379 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 ZNF623O75123 536 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 PRPF6O94906 941 aaKnown RBP17.22■□□□□ 0.35
C8orf88-201ENST00000517562 EOMESO95936 686 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 ITGA4P13612 1032 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 GAP43P17677 238 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 GRIN2CQ14957 1233 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 SLC27A1Q6PCB7 646 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
C8orf88-201ENST00000517562 TMEM192Q8IY95 271 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 FIBCD1Q8N539 461 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 DEFB123Q8N688 67 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 CEP120Q8N960 986 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 ARNTL2Q8WYA1 636 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 BICD1Q96G01 975 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 PRIMPOLQ96LW4 560 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 TRIM6Q9C030 488 aaPredicted RBP17.22■□□□□ 0.35
C8orf88-201ENST00000517562 LRRC27Q9C0I9 530 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 HAPLN2Q9GZV7 340 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
C8orf88-201ENST00000517562 TYW1Q9NV66 732 aaKnown RBP17.22■□□□□ 0.35
C8orf88-201ENST00000517562 SNTG2Q9NY99 539 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 PARP2Q9UGN5 583 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
C8orf88-201ENST00000517562 SZT2Q5T011 3432 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 N4BP3O15049 544 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 KLRC4O43908 158 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 OFD1O75665 1012 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 GCNT3O95395 438 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 MATR3P43243 847 aaKnown RBP eCLIP17.21■□□□□ 0.35
C8orf88-201ENST00000517562 GTF2BQ00403 316 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 PNOCQ13519 176 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.35
C8orf88-201ENST00000517562 SPOUT1Q5T280 376 aaKnown RBP17.21■□□□□ 0.35
C8orf88-201ENST00000517562 ZNF697Q5TEC3 545 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
C8orf88-201ENST00000517562 ZFP42Q96MM3 310 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
C8orf88-201ENST00000517562 TRAIPQ9BWF2 469 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 PRDM12Q9H4Q4 367 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
C8orf88-201ENST00000517562 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 ANKFY1Q9P2R3 1169 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 USP25Q9UHP3 1055 aa17.21■□□□□ 0.35
C8orf88-201ENST00000517562 TNFSF13BQ9Y275 285 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms