RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 FGFR1OP2Q9NVK5 253 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 RAB20Q9NX57 234 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DDX56Q9NY93 547 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DONSONQ9NYP3 566 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMOD4Q9NZQ9 345 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 NDUFA13Q9P0J0 144 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 GCNT4Q9P109 453 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CPSF2Q9P2I0 782 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 STOML1Q9UBI4 398 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 APEX2Q9UBZ4 518 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIM10Q9UDY6 481 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ASIC3Q9UHC3 531 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 PCYOX1Q9UHG3 505 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 IP6K2Q9UHH9 426 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DDX20Q9UHI6 824 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 AMACRQ9UHK6 382 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 HERC5Q9UII4 1024 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM59LQ9UK28 342 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCNL1Q9UK58 526 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 FEM1BQ9UK73 627 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SUFUQ9UMX1 484 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 RPL26L1Q9UNX3 145 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SMG5Q9UPR3 1016 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF148Q9UQR1 794 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DRG1Q9Y295 367 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 REXO2Q9Y3B8 237 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ACTL7BQ9Y614 415 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 SCINQ9Y6U3 715 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 ROBO3Q96MS0 1386 aa2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 COL14A1Q05707 1796 aaKnown RBP2.21□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRP6O75581 1613 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KAT6AQ92794 2004 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FRMPD2Q68DX3 1309 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM205AQ6ZU69 1335 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CNTNAP4Q9C0A0 1308 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDK5RAP2Q96SN8 1893 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TIAM2Q8IVF5 1701 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KIAA1551Q9HCM1 1747 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DUOX1Q9NRD9 1551 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TNS2Q63HR2 1409 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GOLGA8QA0A0J9YX86 632 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GOLGA8OA6NCC3 632 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 POTEMA6NI47 508 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF233A6NK53 670 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SMIM23A6NLE4 172 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PP2D1A8MPX8 630 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM110-MUSTN1A8MSY1 372 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PHF20L1A8MW92 1017 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 A8MXQ7 604 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RASA4BC9J798 803 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L10C9JJH3 530 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 F5H6K3 240 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GOLGA8NF8WBI6 632 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 H0YIN7 160 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 UBE2Q2LH0YL09 131 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 I3L4J1 428 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 K7ERI5 159 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SNAP23O00161 211 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 HAX1O00165 279 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PIK3CDO00329 1044 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDE2AO00408 941 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FOXN3O00409 490 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ABLIM1O14639 778 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 LIN7AO14910 233 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPP1R12AO14974 1030 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PMM2O15305 246 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GYG2O15488 501 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TTI1O43156 1089 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPIP5K2O43314 1243 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RASA4O43374 803 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NCK2O43639 380 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MGRN1O60291 552 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC22O60826 627 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SMIM24O75264 130 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ENTPD3O75355 529 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NEBLO76041 1014 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TDP2O95551 362 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ANP32DO95626 131 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TTC4O95801 387 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ABL1P00519 1130 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SERPINB2P05120 415 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CALB1P05937 261 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT7P08729 469 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RPSAP08865 295 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GSTA2P09210 222 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM153BP0C7A2 387 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP2D6P10635 497 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ESRRAP11474 423 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ACTN1P12814 892 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT5P13647 590 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 P4HA1P13674 534 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 BRAFP15056 766 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NPR1P16066 1061 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ACADSP16219 412 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TSHRP16473 764 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP11B2P19099 503 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TNNI1P19237 187 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TBXAS1P24557 533 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms