RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 VSIG10L2P0DP72 767 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 HNRNPMP52272 730 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 MANFP55145 182 aaKnown RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 GRM7Q14831 915 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 DDB1Q16531 1140 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 ATP13A4Q4VNC1 1196 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 BROXQ5VW32 411 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 ZNF808Q8N4W9 903 aaPredicted RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 RPL10LQ96L21 214 aaKnown RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 IFT22Q9H7X7 185 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 CAAP1Q9H8G2 361 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 C14orf93Q9H972 538 aaKnown RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 RGS17Q9UGC6 210 aaPredicted RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 APOBEC2Q9Y235 224 aaKnown RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 A2ML1A8K2U0 1454 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 A2MP01023 1474 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 MBD5Q9P267 1494 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 CDC42BPAQ5VT25 1732 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 ATP7AQ04656 1500 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 SPAG9O60271 1321 aaKnown RBP4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 VWDEQ8N2E2 1590 aa4.4□□□□□ -1.71
RNU4-29P-201ENST00000515943 DNMT1P26358 1616 aaKnown RBP4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 SHANK2Q9UPX8 1470 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 PRSS38A1L453 326 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 ZEB2O60315 1214 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 JUNP05412 331 aaKnown RBP4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 SOX5P35711 763 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 ID4P47928 161 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 MASP1P48740 699 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 MAN2A1Q16706 1144 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 FRMD7Q6ZUT3 714 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 DDX46Q7L014 1031 aaKnown RBP4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 STRA8Q7Z7C7 330 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 UNC5BQ8IZJ1 945 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 D2HGDHQ8N465 521 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 AFAP1L2Q8N4X5 818 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 UBR7Q8N806 425 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 PIK3C3Q8NEB9 887 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 TMEM176AQ96HP8 235 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 FDXACB1Q9BRP7 624 aaPredicted RBP4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 WNT8AQ9H1J5 351 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 IL23AQ9NPF7 189 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 TLR9Q9NR96 1032 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 TMPRSS11EQ9UL52 423 aa4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 ZNF644Q9H582 1327 aaPredicted RBP4.39□□□□□ -1.71
RNU4-29P-201ENST00000515943 CLTCQ00610 1675 aaKnown RBP4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 MED14O60244 1454 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 CCDC18Q5T9S5 1454 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 CPS1P31327 1500 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 DAPK3O43293 454 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 IGSF3O75054 1194 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 FSBPO95073 299 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 GAAP10253 952 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 ACRV1P26436 265 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 GPR15P49685 360 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 STRN3Q13033 797 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 CCDC178Q5BJE1 867 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 GGT6Q6P531 493 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 CRIP3Q6Q6R5 217 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 RNF207Q6ZRF8 634 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 GAREM2Q75VX8 874 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 RASSF3Q86WH2 238 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 LYSMD2Q8IV50 215 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 SLC41A1Q8IVJ1 513 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 CLRN3Q8NCR9 226 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 CHAC2Q8WUX2 184 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 UIMC1Q96RL1 719 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 MPHOSPH9Q99550 1183 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 TTC1Q99614 292 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 SH3BP1Q9Y3L3 701 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 NUMBLQ9Y6R0 609 aa4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 SUPT6HQ7KZ85 1726 aaKnown RBP4.38□□□□□ -1.71
RNU4-29P-201ENST00000515943 PZPP20742 1482 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 FYCO1Q9BQS8 1478 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 UBE2QL1A1L167 161 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 GOLGA8BA8MQT2 603 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 CAPN14A8MX76 684 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 RAB11FIP3O75154 756 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 ULK1O75385 1050 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 LY86O95711 162 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 CLEC2LP0C7M8 214 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 KIR2DL3P43628 341 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 SESN3P58005 492 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 ZXDAP98168 799 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 PPARAQ07869 468 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 SPTY2D1Q68D10 685 aaPredicted RBP4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 KRT40Q6A162 431 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 HDGFL2Q7Z4V5 671 aaPredicted RBP4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 GAB3Q8WWW8 586 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 TCF25Q9BQ70 676 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 ZNF747Q9BV97 191 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 ANO3Q9BYT9 981 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 PRDM12Q9H4Q4 367 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 TOPORSQ9NS56 1045 aaPredicted RBP4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 USP18Q9UMW8 372 aa4.37□□□□□ -1.71
RNU4-29P-201ENST00000515943 NOC2LQ9Y3T9 749 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms