RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 SMTNP53814 917 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 RNASELQ05823 741 aaKnown RBP21.36■■□□□ 1.01
LMNA-225ENST00000515824 FOXD4L6Q3SYB3 417 aaPredicted RBP21.36■■□□□ 1.01
LMNA-225ENST00000515824 RRAGBQ5VZM2 374 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 ATL3Q6DD88 541 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 FOXD4L3Q6VB84 417 aaPredicted RBP21.36■■□□□ 1.01
LMNA-225ENST00000515824 GPBP1Q86WP2 473 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
LMNA-225ENST00000515824 ADPGKQ9BRR6 497 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 NTPCRQ9BSD7 190 aaKnown RBP21.36■■□□□ 1.01
LMNA-225ENST00000515824 TBC1D13Q9NVG8 400 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 PUF60Q9UHX1 559 aaKnown RBP21.36■■□□□ 1.01
LMNA-225ENST00000515824 COG5Q9UP83 839 aa21.36■■□□□ 1.01
LMNA-225ENST00000515824 KRT18P05783 430 aaKnown RBP21.35■■□□□ 1.01
LMNA-225ENST00000515824 KRT17Q04695 432 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 PKP1Q13835 747 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 MCM6Q14566 821 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 ARSHQ5FYA8 562 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 SPIRE2Q8WWL2 714 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 ATXN2LQ8WWM7 1075 aaKnown RBP21.35■■□□□ 1.01
LMNA-225ENST00000515824 FAM193BQ96PV7 902 aaPredicted RBP21.35■■□□□ 1.01
LMNA-225ENST00000515824 APOL6Q9BWW8 343 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 RNF39Q9H2S5 420 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 SPG21Q9NZD8 308 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 LARSQ9P2J5 1176 aaKnown RBP21.35■■□□□ 1.01
LMNA-225ENST00000515824 ARHGAP28Q9P2N2 729 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 STK17AQ9UEE5 414 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 ODF2LQ9ULJ1 636 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 GIT1Q9Y2X7 761 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 HES2Q9Y543 173 aa21.35■■□□□ 1.01
LMNA-225ENST00000515824 NPHP3-ACAD11A0A0J9YXS1 232 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 TTLL13PA6NNM8 815 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 CSPG5O95196 566 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 BCAR1P56945 870 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 PLCB3Q01970 1234 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 CAMK1Q14012 370 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 MICAL1Q8TDZ2 1067 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 LRRC15Q8TF66 581 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 HLA-CQ95604 372 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 PPP2R3CQ969Q6 453 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 NXF3Q9H4D5 531 aaKnown RBP21.34■■□□□ 1.01
LMNA-225ENST00000515824 PDZD7Q9H5P4 517 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 NRDE2Q9H7Z3 1164 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 CFAP45Q9UL16 551 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 USP20Q9Y2K6 914 aa21.34■■□□□ 1.01
LMNA-225ENST00000515824 SLC16A4O15374 487 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 ZC3H11AO75152 810 aaKnown RBP eCLIP21.33■■□□□ 1.01
LMNA-225ENST00000515824 DNAJB1P25685 340 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 PBX3P40426 434 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 CACNB1Q02641 598 aaPredicted RBP21.33■■□□□ 1.01
LMNA-225ENST00000515824 TCEAL5Q5H9L2 206 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 NT5DC1Q5TFE4 455 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 ATF7IP2Q5U623 682 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 CCDC73Q6ZRK6 1079 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 APBB1IPQ7Z5R6 666 aaPredicted RBP21.33■■□□□ 1.01
LMNA-225ENST00000515824 MRPS27Q92552 414 aaKnown RBP21.33■■□□□ 1.01
LMNA-225ENST00000515824 GAD1Q99259 594 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 REEP2Q9BRK0 252 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 MRPL4Q9BYD3 311 aaKnown RBP21.33■■□□□ 1.01
LMNA-225ENST00000515824 GBP3Q9H0R5 595 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 PARP2Q9UGN5 583 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 LZTS1Q9Y250 596 aa21.33■■□□□ 1.01
LMNA-225ENST00000515824 UNC80Q8N2C7 3258 aa21.33■■□□□ 1
LMNA-225ENST00000515824 ARL5CA6NH57 179 aa21.32■■□□□ 1
LMNA-225ENST00000515824 H0YCG3 227 aa21.32■■□□□ 1
LMNA-225ENST00000515824 NCK2O43639 380 aa21.32■■□□□ 1
LMNA-225ENST00000515824 FAM13AO94988 1023 aa21.32■■□□□ 1
LMNA-225ENST00000515824 POMCP01189 267 aa21.32■■□□□ 1
LMNA-225ENST00000515824 ALDH2P05091 517 aa21.32■■□□□ 1
LMNA-225ENST00000515824 AKAP5P24588 427 aa21.32■■□□□ 1
LMNA-225ENST00000515824 MLH1P40692 756 aa21.32■■□□□ 1
LMNA-225ENST00000515824 MRPS5P82675 430 aaKnown RBP21.32■■□□□ 1
LMNA-225ENST00000515824 STRN3Q13033 797 aa21.32■■□□□ 1
LMNA-225ENST00000515824 AAK1Q2M2I8 961 aa21.32■■□□□ 1
LMNA-225ENST00000515824 SLC39A11Q8N1S5 342 aa21.32■■□□□ 1
LMNA-225ENST00000515824 KCNG4Q8TDN1 519 aa21.32■■□□□ 1
LMNA-225ENST00000515824 TMEM169Q96HH4 297 aa21.32■■□□□ 1
LMNA-225ENST00000515824 TLR9Q9NR96 1032 aa21.32■■□□□ 1
LMNA-225ENST00000515824 NT5C1B-RDH14C9J2C7 533 aa21.31■■□□□ 1
LMNA-225ENST00000515824 INPPL1O15357 1258 aa21.31■■□□□ 1
LMNA-225ENST00000515824 CUTAO60888 179 aa21.31■■□□□ 1
LMNA-225ENST00000515824 BRD1O95696 1058 aa21.31■■□□□ 1
LMNA-225ENST00000515824 EDN1P05305 212 aa21.31■■□□□ 1
LMNA-225ENST00000515824 GALTP07902 379 aa21.31■■□□□ 1
LMNA-225ENST00000515824 AFF1P51825 1210 aaKnown RBP21.31■■□□□ 1
LMNA-225ENST00000515824 GIT2Q14161 759 aa21.31■■□□□ 1
LMNA-225ENST00000515824 DCAF4L1Q3SXM0 396 aa21.31■■□□□ 1
LMNA-225ENST00000515824 EEF1DP3Q658K8 133 aa21.31■■□□□ 1
LMNA-225ENST00000515824 PDE12Q6L8Q7 609 aaKnown RBP21.31■■□□□ 1
LMNA-225ENST00000515824 SV2BQ7L1I2 683 aa21.31■■□□□ 1
LMNA-225ENST00000515824 ZNF280BQ86YH2 543 aa21.31■■□□□ 1
LMNA-225ENST00000515824 MYCT1Q8N699 235 aa21.31■■□□□ 1
LMNA-225ENST00000515824 TMEM161BQ8NDZ6 487 aa21.31■■□□□ 1
LMNA-225ENST00000515824 ACO2Q99798 780 aaKnown RBP21.31■■□□□ 1
LMNA-225ENST00000515824 PANK2Q9BZ23 570 aa21.31■■□□□ 1
LMNA-225ENST00000515824 ZHX3Q9H4I2 956 aa21.31■■□□□ 1
LMNA-225ENST00000515824 PARVGQ9HBI0 331 aa21.31■■□□□ 1
LMNA-225ENST00000515824 TNFSF13BQ9Y275 285 aa21.31■■□□□ 1
LMNA-225ENST00000515824 SPTBN5Q9NRC6 3674 aaKnown RBP21.3■■□□□ 1
LMNA-225ENST00000515824 KIAA1671Q9BY89 1806 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms