RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ADRA1BP35368 520 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 FAPQ12884 760 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 BROXQ5VW32 411 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 UNQ6494/PRO21346Q6UXR6 183 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 STRA8Q7Z7C7 330 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 SLC41A1Q8IVJ1 513 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 FAM177A1Q8N128 213 aaPredicted RBP4.53□□□□□ -1.68
HERC4-215ENST00000515753 PROKR1Q8TCW9 393 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 FERMT2Q96AC1 680 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 ARL8AQ96BM9 186 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 HIST1H2AHQ96KK5 128 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 ZNF512Q96ME7 567 aaPredicted RBP4.53□□□□□ -1.68
HERC4-215ENST00000515753 HIST1H2AJQ99878 128 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 SOX7Q9BT81 388 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 PCDHB6Q9Y5E3 794 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 PPP2R3BQ9Y5P8 575 aa4.53□□□□□ -1.68
HERC4-215ENST00000515753 NRP2O60462 931 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 MFAP3LO75121 409 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 VSIG10L2P0DP72 767 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 HK1P19367 917 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 PTTG1IPP53801 180 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 STRN3Q13033 797 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 CLRN3Q8NCR9 226 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 ACAP3Q96P50 834 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 ORAI2Q96SN7 254 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 C14orf93Q9H972 538 aaKnown RBP4.52□□□□□ -1.69
HERC4-215ENST00000515753 TMPRSS11EQ9UL52 423 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 SORCS3Q9UPU3 1222 aa4.52□□□□□ -1.69
HERC4-215ENST00000515753 GRXCR1A8MXD5 290 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 GOLGA6L6A8MZA4 724 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 GPR39O43194 453 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 FSBPO95073 299 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 ID4P47928 161 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 MEF2AQ02078 507 aaPredicted RBP4.51□□□□□ -1.69
HERC4-215ENST00000515753 STAT4Q14765 748 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 FSCN1Q16658 493 aaKnown RBP4.51□□□□□ -1.69
HERC4-215ENST00000515753 CT47A1Q5JQC4 288 aaPredicted RBP4.51□□□□□ -1.69
HERC4-215ENST00000515753 RHOUQ7L0Q8 258 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 SPATS2Q86XZ4 545 aaKnown RBP4.51□□□□□ -1.69
HERC4-215ENST00000515753 LYSMD2Q8IV50 215 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 SYNE4Q8N205 404 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 MDGA1Q8NFP4 955 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 CPT1CQ8TCG5 803 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 LENG9Q96B70 501 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 NOL10Q9BSC4 688 aaKnown RBP4.51□□□□□ -1.69
HERC4-215ENST00000515753 MS4A5Q9H3V2 200 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 RIOX1Q9H6W3 641 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 SPC25Q9HBM1 224 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.51□□□□□ -1.69
HERC4-215ENST00000515753 ZNHIT2Q9UHR6 403 aa4.51□□□□□ -1.69
HERC4-215ENST00000515753 PRSS38A1L453 326 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 DNAJC6O75061 913 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 RAB11FIP3O75154 756 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 APOL3O95236 402 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 ABHD16AO95870 558 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 LMNAP02545 664 aaKnown RBP4.5□□□□□ -1.69
HERC4-215ENST00000515753 JUNP05412 331 aaKnown RBP4.5□□□□□ -1.69
HERC4-215ENST00000515753 PTPAQ15257 358 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 CCDC142Q17RM4 750 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 FAM214AQ32MH5 1076 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 LY6G5CQ5SRR4 150 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 RNF219Q5W0B1 726 aaPredicted RBP4.5□□□□□ -1.69
HERC4-215ENST00000515753 MFSD5Q6N075 450 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 KCNV1Q6PIU1 500 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 UBR7Q8N806 425 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 ST8SIA2Q92186 375 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 PAWRQ96IZ0 340 aaKnown RBP4.5□□□□□ -1.69
HERC4-215ENST00000515753 PACSIN3Q9UKS6 424 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 FZD1Q9UP38 647 aa4.5□□□□□ -1.69
HERC4-215ENST00000515753 NOC2LQ9Y3T9 749 aaKnown RBP4.5□□□□□ -1.69
HERC4-215ENST00000515753 GRID2IPA4D2P6 1211 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 NRP1O14786 923 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 DAPK3O43293 454 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 IPO13O94829 963 aaKnown RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 RHOBTB3O94955 611 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 SCAF4O95104 1147 aaKnown RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 PCDH8O95206 1070 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 ITGB1P05556 798 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 GAAP10253 952 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 GNAT2P19087 354 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 ENPP1P22413 925 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 KIR2DL3P43628 341 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 NPEPPSP55786 919 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 WNT3AP56704 352 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 NRG3P56975 720 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 MRPS21P82921 87 aaKnown RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 SPIDRQ14159 915 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 PDCD1Q15116 288 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 PITRM1Q5JRX3 1037 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 RNF187Q5TA31 235 aaPredicted RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 HTR3DQ70Z44 454 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 HDGFL2Q7Z4V5 671 aaPredicted RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 NECAB2Q7Z6G3 386 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 GLB1L2Q8IW92 636 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 CMTM4Q8IZR5 234 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 OR14C36Q8NHC7 312 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 FDXACB1Q9BRP7 624 aaPredicted RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 ZNF768Q9H5H4 540 aaKnown RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 TOPORSQ9NS56 1045 aaPredicted RBP4.49□□□□□ -1.69
HERC4-215ENST00000515753 PTGFRNQ9P2B2 879 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms