RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 TMC7Q7Z402 723 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 PABPC5Q96DU9 382 aaKnown RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 TCF25Q9BQ70 676 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 TLE6Q9H808 572 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 ENTPD7Q9NQZ7 604 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 CACNG4Q9UBN1 327 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 PARP2Q9UGN5 583 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 PUF60Q9UHX1 559 aaKnown RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 A0A1B0GUA9 196 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 ARL5CA6NH57 179 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 STX6O43752 255 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 PLA2G4BP0C869 781 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 UBA7P41226 1012 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 NAMPTP43490 491 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 NPTX2P47972 431 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 SCNN1GP51170 649 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 KRT17Q04695 432 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 MAPK7Q13164 816 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 ADAM15Q13444 863 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 PTPAQ15257 358 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 ARL6IP4Q66PJ3 421 aaKnown RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 PTCRAQ6ISU1 281 aaPredicted RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 LLGL2Q6P1M3 1020 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 VN1R2Q8NFZ6 395 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 URGCPQ8TCY9 931 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 SNX21Q969T3 373 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 EPSTI1Q96J88 318 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 MRPL9Q9BYD2 267 aaKnown RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 NFKBIZQ9BYH8 718 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 PRMT7Q9NVM4 692 aaPredicted RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 PRG3Q9Y2Y8 225 aaPredicted RBP12.69□□□□□ -0.38
VCAN-212ENST00000515397 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 RALGAPA2Q2PPJ7 1873 aa12.69□□□□□ -0.38
VCAN-212ENST00000515397 K7ERI5 159 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 FSCN2O14926 492 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 SLC16A4O15374 487 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 TBX10O75333 385 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 CXCL14O95715 111 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 OR1G1P47890 313 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 NDUFV1P49821 464 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 SLC12A3P55017 1021 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 UBE3AQ05086 875 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 MCM6Q14566 821 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 MAPK6Q16659 721 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 LEXMQ3ZCV2 418 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 HYIQ5T013 277 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 TAS1R1Q7RTX1 841 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 TMEM169Q96HH4 297 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
VCAN-212ENST00000515397 USP28Q96RU2 1077 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 APOL5Q9BWW9 433 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 VN1R3Q9BXE9 311 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 CD320Q9NPF0 282 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 SNTG2Q9NY99 539 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 BARX2Q9UMQ3 279 aaPredicted RBP12.68□□□□□ -0.38
VCAN-212ENST00000515397 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
VCAN-212ENST00000515397 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 ACKR2O00590 384 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 NRP1O14786 923 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 GLP2RO95838 553 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 ALDH2P05091 517 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 PLCG1P19174 1290 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
VCAN-212ENST00000515397 FAM187BQ17R55 369 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 TAS1R3Q7RTX0 852 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
VCAN-212ENST00000515397 GSTCDQ8NEC7 633 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 CCDC51Q96ER9 411 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 ZBTB45Q96K62 511 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms