RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
PTCD2-210ENST00000515198 CDR2LQ86X02 465 aaPredicted RBP13.75□□□□□ -0.21
PTCD2-210ENST00000515198 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
PTCD2-210ENST00000515198 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 SPIRE2Q8WWL2 714 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 MRPL38Q96DV4 380 aaKnown RBP13.75□□□□□ -0.21
PTCD2-210ENST00000515198 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 NTPCRQ9BSD7 190 aaKnown RBP13.75□□□□□ -0.21
PTCD2-210ENST00000515198 TMEM134Q9H6X4 195 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 INPP5FQ9Y2H2 1132 aa13.75□□□□□ -0.21
PTCD2-210ENST00000515198 NPHP3-ACAD11A0A0J9YXS1 232 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 MEIS3P2A8K0S8 358 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 H0YCG3 227 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 SLC16A4O15374 487 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 TBCAO75347 108 aaKnown RBP13.74□□□□□ -0.21
PTCD2-210ENST00000515198 OFD1O75665 1012 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 ITGB1P05556 798 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 PPM1AP35813 382 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 KRT85P78386 507 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 STRN3Q13033 797 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 LRRC55Q6ZSA7 311 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 KLHL23Q8NBE8 558 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 APOL6Q9BWW8 343 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 PDZD7Q9H5P4 517 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 ALG13Q9NP73 1137 aaKnown RBP13.74□□□□□ -0.21
PTCD2-210ENST00000515198 KANSL3Q9P2N6 904 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 PLAGL2Q9UPG8 496 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 ZDHHC9Q9Y397 364 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 PLXNA4Q9HCM2 1894 aa13.74□□□□□ -0.21
PTCD2-210ENST00000515198 TDRD15B5MCY1 1934 aaKnown RBP13.73□□□□□ -0.21
PTCD2-210ENST00000515198 GRM6O15303 877 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 SCP2P22307 547 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 ALDH7A1P49419 539 aaKnown RBP13.73□□□□□ -0.21
PTCD2-210ENST00000515198 GIT2Q14161 759 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
PTCD2-210ENST00000515198 DCAF4L1Q3SXM0 396 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 ATF7IP2Q5U623 682 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 MYCT1Q8N699 235 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 PDILTQ8N807 584 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
PTCD2-210ENST00000515198 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 NXF3Q9H4D5 531 aaKnown RBP13.73□□□□□ -0.21
PTCD2-210ENST00000515198 ZHX3Q9H4I2 956 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 PARVGQ9HBI0 331 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 GIT1Q9Y2X7 761 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 HES2Q9Y543 173 aa13.73□□□□□ -0.21
PTCD2-210ENST00000515198 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTCD2-210ENST00000515198 FGF18O76093 207 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 ZNF131P52739 623 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 NCKAP1LP55160 1127 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 UBE3AQ05086 875 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
PTCD2-210ENST00000515198 NT5DC1Q5TFE4 455 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 SLC17A8Q8NDX2 589 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 TMEM161BQ8NDZ6 487 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 SPPL3Q8TCT6 385 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 POF1BQ8WVV4 589 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 DDX12PQ92771 950 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 SPATA32Q96LK8 384 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
PTCD2-210ENST00000515198 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 GBP3Q9H0R5 595 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 FAM13BQ9NYF5 915 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 RCOR1Q9UKL0 485 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 PCDHA7Q9UN72 937 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
PTCD2-210ENST00000515198 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
PTCD2-210ENST00000515198 ATG2AQ2TAZ0 1938 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 A0A087X0B3 334 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 K7ENM7 598 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 INPPL1O15357 1258 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 TRAK2O60296 914 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 EDN1P05305 212 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 MAPTP10636 758 aaKnown RBP13.71□□□□□ -0.21
PTCD2-210ENST00000515198 ABCD1P33897 745 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 MLH1P40692 756 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 BCAR1P56945 870 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 NUCB2P80303 420 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 KRT17Q04695 432 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 SHC4Q6S5L8 630 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 DYMQ7RTS9 669 aa13.71□□□□□ -0.21
PTCD2-210ENST00000515198 TAS1R3Q7RTX0 852 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms