RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 BCAR3O75815 825 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 APPP05067 770 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 GP1BBP13224 206 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 ZSCAN20P17040 1043 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 HSD17B4P51659 736 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 ZNF543Q08ER8 600 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 CDC37Q16543 378 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 FAM228AQ86W67 206 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 ITFG1Q8TB96 612 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 SSH3Q8TE77 659 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 ADAMTS14Q8WXS8 1223 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 FCRL3Q96P31 734 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 PLA2G2FQ9BZM2 168 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 DUSP15Q9H1R2 295 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 SMARCAD1Q9H4L7 1026 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 NXF1Q9UBU9 619 aaKnown RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 NUP205Q92621 2012 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 MTCL1Q9Y4B5 1905 aaKnown RBP8.76□□□□□ -1.01
CLDND1-229ENST00000513988 MGAQ8IWI9 3026 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 FLNCQ14315 2725 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 UPK3BL1B0FP48 263 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 TRIM6-TRIM34B2RNG4 842 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 PATE3B3GLJ2 98 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 SPATA31C2B4DYI2 1134 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 B8ZZF3 427 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 UPK3BL2E5RIL1 263 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 FIBPO43427 364 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 ZMYND10O75800 440 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 PDHBP11177 359 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 TOP1P11387 765 aaKnown RBP8.75□□□□□ -1.01
CLDND1-229ENST00000513988 CCNE1P24864 410 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 MAPK8P45983 427 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 SLC11A1P49279 550 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 FAM193AP78312 1265 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 IRX4P78413 519 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 RNASELQ05823 741 aaKnown RBP8.75□□□□□ -1.01
CLDND1-229ENST00000513988 CYP4F3Q08477 520 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 TAF1BQ53T94 588 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-229ENST00000513988 ZSCAN25Q6NSZ9 544 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 PDXDC2PQ6P474 469 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 STOX1Q6ZVD7 989 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 PALB2Q86YC2 1186 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 NPAS3Q8IXF0 933 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 TRAPPC12Q8WVT3 735 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 TNPO1Q92973 898 aaKnown RBP8.75□□□□□ -1.01
CLDND1-229ENST00000513988 GBP3Q9H0R5 595 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 NRDE2Q9H7Z3 1164 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 PRKRIP1Q9H875 184 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-229ENST00000513988 NOP58Q9Y2X3 529 aaKnown RBP8.75□□□□□ -1.01
CLDND1-229ENST00000513988 PAXBP1Q9Y5B6 917 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 WDR81Q562E7 1941 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 SALL3Q9BXA9 1300 aa8.75□□□□□ -1.01
CLDND1-229ENST00000513988 TEX51A0A1B0GUA7 166 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 CCDC194A0A1B0GVG4 234 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 MEFVO15553 781 aaPredicted RBP8.74□□□□□ -1.01
CLDND1-229ENST00000513988 TGM5O43548 720 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 ITPKBP27987 946 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 LMAN2Q12907 356 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 SEMA3BQ13214 749 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 SEMA3FQ13275 785 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 HNRNPDQ14103 355 aaKnown RBP8.74□□□□□ -1.01
CLDND1-229ENST00000513988 GRM2Q14416 872 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 PLCB4Q15147 1175 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 KRT25Q7Z3Z0 450 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 ZNF280BQ86YH2 543 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 SEPT1Q8WYJ6 367 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 RSPH1Q8WYR4 309 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 IRF7Q92985 503 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 ZFRQ96KR1 1074 aaKnown RBP8.74□□□□□ -1.01
CLDND1-229ENST00000513988 PPP1R16BQ96T49 567 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 OSMRQ99650 979 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 TRMT61BQ9BVS5 477 aaKnown RBP8.74□□□□□ -1.01
CLDND1-229ENST00000513988 ANKMY1Q9P2S6 941 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 DNAJB4Q9UDY4 337 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 POLIQ9UNA4 740 aa8.74□□□□□ -1.01
CLDND1-229ENST00000513988 TSC2P49815 1807 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 C3orf80F5H4A9 247 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 EXTL3O43909 919 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 RANBP6O60518 1105 aaKnown RBP8.73□□□□□ -1.01
CLDND1-229ENST00000513988 C1RP00736 705 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 SOD2P04179 222 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 HOXA13P31271 388 aaPredicted RBP8.73□□□□□ -1.01
CLDND1-229ENST00000513988 NOVP48745 357 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 GLUD2P49448 558 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 CRYBB1P53674 252 aaPredicted RBP8.73□□□□□ -1.01
CLDND1-229ENST00000513988 KARSQ15046 597 aaKnown RBP8.73□□□□□ -1.01
CLDND1-229ENST00000513988 KIZQ2M2Z5 673 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 TANGO2Q6ICL3 276 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 MTHFD1LQ6UB35 978 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 GPR155Q7Z3F1 870 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 CYP2U1Q7Z449 544 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
CLDND1-229ENST00000513988 HDDC3Q8N4P3 179 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 GIMAP8Q8ND71 665 aaPredicted RBP8.73□□□□□ -1.01
CLDND1-229ENST00000513988 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 ING5Q8WYH8 240 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 ELSPBP1Q96BH3 223 aa8.73□□□□□ -1.01
CLDND1-229ENST00000513988 INPP4AQ96PE3 977 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms