RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 NFKBIZQ9BYH8 718 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 TUT1Q9H6E5 874 aaKnown RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 XPNPEP1Q9NQW7 623 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 GNEQ9Y223 722 aaKnown RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 STYXL1Q9Y6J8 313 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 ZNF236Q9UL36 1845 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 K7ENM7 598 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 ARHGAP6O43182 974 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 PIGRP01833 764 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
TPM3-221ENST00000513769 SMPD1P17405 629 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 LACTBP83111 547 aaPredicted RBP10.8□□□□□ -0.68
TPM3-221ENST00000513769 ZBED6P86452 979 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 CDK17Q00537 523 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 SP4Q02446 784 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 RBL2Q08999 1139 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 CETN1Q12798 172 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 STRN3Q13033 797 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 TFDP1Q14186 410 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 EMC2Q15006 297 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 PCBP1Q15365 356 aaKnown RBP eCLIP10.8□□□□□ -0.688e-17■■□□□ 12.6
TPM3-221ENST00000513769 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 PLA2G4FQ68DD2 849 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 ARMCX5Q6P1M9 558 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 MAEAQ7L5Y9 396 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 MAP4K3Q8IVH8 894 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 TC2NQ8N9U0 490 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 XXYLT1Q8NBI6 393 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 SYN2Q92777 582 aaPredicted RBP10.8□□□□□ -0.68
TPM3-221ENST00000513769 FBXL18Q96ME1 805 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 APBA2Q99767 749 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 C16orf70Q9BSU1 422 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 FGFBP2Q9BYJ0 223 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 C2orf40Q9H1Z8 148 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 AGPAT3Q9NRZ7 376 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 TAB2Q9NYJ8 693 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
TPM3-221ENST00000513769 DENND3A2RUS2 1198 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 SLC16A4O15374 487 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 ADCY3O60266 1144 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 AKAP3O75969 853 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 HNRNPH3P31942 346 aaKnown RBP10.79□□□□□ -0.68
TPM3-221ENST00000513769 GTF2H1P32780 548 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 CLCN1P35523 988 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 ADCYAP1R1P41586 468 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 PSMC4P43686 418 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 CPT1AP50416 773 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 SP3Q02447 781 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 KCNA1Q09470 495 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 NOLC1Q14978 699 aaKnown RBP eCLIP10.79□□□□□ -0.68
TPM3-221ENST00000513769 MFSD14CQ5VZR4 134 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 ZPBP2Q6X784 338 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
TPM3-221ENST00000513769 ZNF830Q96NB3 372 aaPredicted RBP10.79□□□□□ -0.68
TPM3-221ENST00000513769 BAG1Q99933 345 aaPredicted RBP10.79□□□□□ -0.68
TPM3-221ENST00000513769 AP5M1Q9H0R1 490 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 POLD4Q9HCU8 107 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 PLCB1Q9NQ66 1216 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
TPM3-221ENST00000513769 MYO6Q9UM54 1294 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 USP20Q9Y2K6 914 aa10.79□□□□□ -0.68
TPM3-221ENST00000513769 PLXNA1Q9UIW2 1896 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 ZBTB42B2RXF5 422 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 DYNC1LI2O43237 492 aaPredicted RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 ZSCAN12O43309 604 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 EXOC3O60645 756 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 N4BP1O75113 896 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 DUSP11O75319 330 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 AFPP02771 609 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 LGALS2P05162 132 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 RPLP2P05387 115 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 KRT13P13646 458 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 AKR1A1P14550 325 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 TRIM21P19474 475 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 GLRA2P23416 452 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 CASP14P31944 242 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 RPIAP49247 311 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 PRMT2P55345 433 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 CCZ1BP86790 482 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 CCZ1P86791 482 aaPredicted RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 PKN2Q16513 984 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 PRPF38BQ5VTL8 546 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 EFCAB12Q6NXP0 572 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 TRMT1LQ7Z2T5 733 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 FAM186BQ8IYM0 893 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 NME8Q8N427 588 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 OR6J1Q8NGC5 347 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 DEPTORQ8TB45 409 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 AFG1LQ8WV93 481 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 COPS5Q92905 334 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 HLA-CQ95604 372 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 KATNAL1Q9BW62 490 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 POLR3FQ9H1D9 316 aaPredicted RBP10.78□□□□□ -0.68
TPM3-221ENST00000513769 KCNF1Q9H3M0 494 aa10.78□□□□□ -0.68
TPM3-221ENST00000513769 RNPEPQ9H4A4 650 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms