RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 CA8P35219 290 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 PBX3P40426 434 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 MCM2P49736 904 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 EFNA5P52803 228 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 FOSBP53539 338 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 CBX2Q14781 532 aaPredicted RBP8.09□□□□□ -1.11
HTT-212ENST00000513639 PPP2R5AQ15172 486 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 TTC38Q5R3I4 469 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 ATAT1Q5SQI0 421 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 UBXN11Q5T124 520 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 HAUS3Q68CZ6 603 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 SLC27A1Q6PCB7 646 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 ELMSAN1Q6PJG2 1045 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
HTT-212ENST00000513639 ZBTB8OSQ8IWT0 167 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 PIP4P2Q8N4L2 257 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 SUSD6Q92537 303 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 EDAQ92838 391 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.11
HTT-212ENST00000513639 IFT74Q96LB3 600 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 RIPOR3Q96MK2 946 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 COLEC11Q9BWP8 271 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 GBP3Q9H0R5 595 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 S1PR5Q9H228 398 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 TMEM60Q9H2L4 133 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 ADAM7Q9H2U9 754 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 XPNPEP1Q9NQW7 623 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 MRPL17Q9NRX2 175 aaKnown RBP8.09□□□□□ -1.11
HTT-212ENST00000513639 BMP2KQ9NSY1 1161 aaPredicted RBP8.09□□□□□ -1.11
HTT-212ENST00000513639 PRMT7Q9NVM4 692 aaPredicted RBP8.09□□□□□ -1.11
HTT-212ENST00000513639 DZANK1Q9NVP4 752 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 HCSTQ9UBK5 93 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 DNM3Q9UQ16 869 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 NR2E1Q9Y466 385 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 USP15Q9Y4E8 981 aaPredicted RBP8.09□□□□□ -1.11
HTT-212ENST00000513639 PCDHGC5Q9Y5F6 944 aa8.09□□□□□ -1.11
HTT-212ENST00000513639 LOXHD1Q8IVV2 1947 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.08□□□□□ -1.12
HTT-212ENST00000513639 ARL5CA6NH57 179 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 POTEMA6NI47 508 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 NRP1O14786 923 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 INPPL1O15357 1258 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 TSPAN1O60635 241 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 CLASP2O75122 1294 aaKnown RBP8.08□□□□□ -1.12
HTT-212ENST00000513639 C1RP00736 705 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 POMCP01189 267 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 GLRA2P23416 452 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 KLRC2P26717 231 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 MTHFRP42898 656 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 SLC11A1P49279 550 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 MBTD1Q05BQ5 628 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
HTT-212ENST00000513639 CAPSQ13938 189 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 MAPK6Q16659 721 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 FAM187BQ17R55 369 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 KRT79Q5XKE5 535 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 SYCE2Q6PIF2 218 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 PADI6Q6TGC4 694 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 DTHD1Q6ZMT9 781 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 KCTD17Q8N5Z5 321 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 SMG8Q8ND04 991 aaKnown RBP8.08□□□□□ -1.12
HTT-212ENST00000513639 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 KIFAP3Q92845 792 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 FAM122AQ96E09 287 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 RPGRIP1Q96KN7 1286 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 KIF2CQ99661 725 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 POLR3FQ9H1D9 316 aaPredicted RBP8.08□□□□□ -1.12
HTT-212ENST00000513639 KCNH6Q9H252 994 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 FZD8Q9H461 694 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 IPPQ9Y573 584 aa8.08□□□□□ -1.12
HTT-212ENST00000513639 PHLPP2Q6ZVD8 1323 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 NLRC5Q86WI3 1866 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 MUC6Q6W4X9 2439 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 A0A087WWV3 80 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 LRRIQ4A6NIV6 560 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 MEIS3P2A8K0S8 358 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 H3BQV1 296 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 ACKR2O00590 384 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 USO1O60763 962 aaKnown RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 MED24O75448 989 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 DDHD2O94830 711 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 ARF4P18085 180 aaPredicted RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 CCT6AP40227 531 aaKnown RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 PRPHP41219 470 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 OR1G1P47890 313 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 ST3GAL1Q11201 340 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 PTGDRQ13258 359 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 PRPF4BQ13523 1007 aaKnown RBP8.07□□□□□ -1.12
HTT-212ENST00000513639 AMHR2Q16671 573 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 RILPL1Q5EBL4 403 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 MCTP1Q6DN14 999 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 KIAA1841Q6NSI8 718 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 MAEAQ7L5Y9 396 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 CABP7Q86V35 215 aa8.07□□□□□ -1.12
HTT-212ENST00000513639 GPR65Q8IYL9 337 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms