RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MBLAC2Q68D91 279 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 COPS6Q7L5N1 327 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 SH3TC2Q8TF17 1288 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 ZG16BQ96DA0 208 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 AJUBAQ96IF1 538 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 CFAP53Q96M91 514 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 YIPF4Q9BSR8 244 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 CSRNP2Q9H175 543 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 ZDHHC9Q9Y397 364 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 SLC12A7Q9Y666 1083 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 UNC80Q8N2C7 3258 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 XDHP47989 1333 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 MYO1BO43795 1136 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 KLHL18O94889 574 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 CCL5P13501 91 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 COMTP21964 271 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 FBLP22087 321 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 VAMP1P23763 118 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 DCTN1Q14203 1278 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 TEPPQ6URK8 271 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 PCSK4Q6UW60 755 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 C17orf99Q6UX52 265 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 Q6ZUG5 572 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 RALYLQ86SE5 291 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 TDHQ8IZJ6 230 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 ADCY4Q8NFM4 1077 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 U2AF1L4Q8WU68 220 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 FAM89AQ96GI7 184 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 CLMNQ96JQ2 1002 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 LMF1Q96S06 567 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 ISCA1Q9BUE6 129 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 COA1Q9GZY4 146 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 GGT7Q9UJ14 662 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 SCAF8Q9UPN6 1271 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 ZNF804BA4D1E1 1349 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 FAM205AQ6ZU69 1335 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 RPTORQ8N122 1335 aa4.72□□□□□ -1.65
PDLIM5-218ENST00000513341 LAMA3Q16787 3333 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 SPTBN5Q9NRC6 3674 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 COL3A1P02461 1466 aaPredicted RBP4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 MED23Q9ULK4 1368 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 CCL15-CCL14A0A0B4J2E2 113 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 TFRCP02786 760 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 CETPP11597 493 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 PLA2G5P39877 138 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 DLGAP5Q15398 846 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 CCL15Q16663 113 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 CCDC152Q4G0S7 254 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 HEATR6Q6AI08 1181 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 TTLL5Q6EMB2 1281 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 IQCEQ6IPM2 695 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 DPY19L2P1Q6NXN4 242 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 TRMT10BQ6PF06 316 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 NECAB2Q7Z6G3 386 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 KIAA0825Q8IV33 1275 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 PLBD2Q8NHP8 589 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 RAET1EQ8TD07 263 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 CACTINQ8WUQ7 758 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 BRI3BPQ8WY22 251 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 EXTL1Q92935 676 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 OPTNQ96CV9 577 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 ZSWIM3Q96MP5 696 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 GNRHR2Q96P88 292 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 CROTQ9UKG9 612 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 RIPOR2Q9Y4F9 1068 aa4.71□□□□□ -1.66
PDLIM5-218ENST00000513341 HGSO14964 777 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 LRG1P02750 347 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 PLS3P13797 630 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 EIF2S2P20042 333 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 PSMC4P43686 418 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 FKBP1AP62942 108 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.661e-7■■■■■ 28.2
PDLIM5-218ENST00000513341 AIMP1Q12904 312 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 TNFAIP1Q13829 316 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 EMC4Q5J8M3 183 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 Q6ZSN1 163 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 Q7L0L9 218 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 ANKRD18AQ8IVF6 992 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 TEX2Q8IWB9 1127 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 REXO1L1PQ8IX06 675 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 FAM43AQ8N2R8 423 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 ZBTB38Q8NAP3 1195 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 NEU4Q8WWR8 484 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 FAM122AQ96E09 287 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 THUMPD2Q9BTF0 503 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 PNNQ9H307 717 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 PHAXQ9H814 394 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 FAM86C1Q9NVL1 165 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 CLEC1BQ9P126 229 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 FZD1Q9UP38 647 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 TTC28Q96AY4 2481 aa4.7□□□□□ -1.66
PDLIM5-218ENST00000513341 ECM29Q5VYK3 1845 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 TCRBV5S2A0A599 114 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 PDE8AO60658 829 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 TADA3O75528 432 aa4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 HSPA5P11021 654 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 CCT4P50991 539 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-218ENST00000513341 SNAPC2Q13487 334 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms