RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 BADQ92934 168 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 GSDMAQ96QA5 445 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 FIZ1Q96SL8 496 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 KIFC3Q9BVG8 833 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 CLSTN2Q9H4D0 955 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 ST6GALNAC4Q9H4F1 302 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 MINDY3Q9H8M7 445 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 MRPL44Q9H9J2 332 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 IL23AQ9NPF7 189 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 PRMT7Q9NVM4 692 aaPredicted RBP8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 RMND1Q9NWS8 449 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
HMGXB3-204ENST00000513318 UBE4BO95155 1302 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 DENND3A2RUS2 1198 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 K7ERI5 159 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 EIF3DO15371 548 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 RHOBTB3O94955 611 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 GCNT3O95395 438 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 PRKCBP05771 671 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 NMT1P30419 496 aaKnown RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 AXLP30530 894 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 CD52P31358 61 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 GTF2BQ00403 316 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 NFX1Q12986 1120 aaKnown RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 STRN3Q13033 797 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 PSMD2Q13200 908 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 GPNMBQ14956 572 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 KLHL40Q2TBA0 621 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 NT5DC1Q5TFE4 455 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 CNKSR3Q6P9H4 555 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 CATSPER4Q7RTX7 472 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 ZNF720Q7Z2F6 126 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 SPATA20Q8TB22 786 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 SEPT8Q92599 483 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 SYAP1Q96A49 352 aaPredicted RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 FTHL17Q9BXU8 183 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 GTPBP4Q9BZE4 634 aaKnown RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 FZD8Q9H461 694 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 AGO3Q9H9G7 860 aaKnown RBP8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 ERVK-5Q9HDB9 667 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 AGPAT5Q9NUQ2 364 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 TBC1D7Q9P0N9 293 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 PADI3Q9ULW8 664 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 ST3GAL5Q9UNP4 418 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 PCDHA5Q9Y5H7 936 aa8.34□□□□□ -1.07
HMGXB3-204ENST00000513318 ACKR2O00590 384 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 TSPAN1O60635 241 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 EFCAB14O75071 495 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 CSDE1O75534 798 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 ZMYND10O75800 440 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 BAIAP3O94812 1187 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 KIF20AO95235 890 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 ACTN1P12814 892 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 FGFR4P22455 802 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 MAGEA10P43363 369 aaPredicted RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 SARSP49591 514 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 NCBP1Q09161 790 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 PRPF4BQ13523 1007 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 CAMK4Q16566 473 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 AMHR2Q16671 573 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 SKOR2Q2VWA4 1001 aaPredicted RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 CCDC183Q5T5S1 534 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 NOTUMQ6P988 496 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 TAS1R3Q7RTX0 852 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 MAP4K3Q8IVH8 894 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 TRIML1Q8N9V2 468 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 CCDC51Q96ER9 411 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 STRA6Q9BX79 667 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 MRPL4Q9BYD3 311 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 TBX20Q9UMR3 447 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 EXOC7Q9UPT5 735 aa8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 PIN4Q9Y237 131 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-204ENST00000513318 ABHD14A-ACY1A0A1B0GW23 586 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 HNRNPDLO14979 420 aaKnown RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 N4BP3O15049 544 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 PIGRP01833 764 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 MYBP10242 640 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 PPP1R2P41236 205 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 CASP5P51878 434 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 IKBKEQ14164 716 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 BMT2Q1RMZ1 405 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 TMEM132AQ24JP5 1023 aa8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 ZC2HC1CQ53FD0 456 aaPredicted RBP8.32□□□□□ -1.08
HMGXB3-204ENST00000513318 L1TD1Q5T7N2 865 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms