RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 GBP3Q9H0R5 595 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 ZHX3Q9H4I2 956 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 RSAD1Q9HA92 442 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 TBC1D13Q9NVG8 400 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 LMCD1Q9NZU5 365 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 PRUNE2Q8WUY3 3088 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 N4BP3O15049 544 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 PPP6R2O75170 966 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 FGF18O76093 207 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 FAM13AO94988 1023 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 POMCP01189 267 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 AKAP5P24588 427 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 DDIT3P35638 169 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
DDX41-212ENST00000511040 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 KCNT2Q6UVM3 1135 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 TAS1R3Q7RTX0 852 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.39■□□□□ 0.05
DDX41-212ENST00000511040 PDILTQ8N807 584 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 CNNM3Q8NE01 707 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 P2RX5Q93086 422 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 GAD1Q99259 594 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 MRPL9Q9BYD2 267 aaKnown RBP15.39■□□□□ 0.05
DDX41-212ENST00000511040 KCND2Q9NZV8 630 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 KLK14Q9P0G3 267 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 ARHGAP28Q9P2N2 729 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
DDX41-212ENST00000511040 MYH11P35749 1972 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 PLXNA4Q9HCM2 1894 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 NT5C1B-RDH14C9J2C7 533 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 B4GALT3O60512 393 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 CUTAO60888 179 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.05
DDX41-212ENST00000511040 IRS1P35568 1242 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 MLH1P40692 756 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 STAT6P42226 847 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 ME1P48163 572 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 BCAR1P56945 870 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 CAMK1Q14012 370 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 GIT2Q14161 759 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 TCEAL5Q5H9L2 206 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 ATF7IP2Q5U623 682 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 SHC4Q6S5L8 630 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 DYMQ7RTS9 669 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 ZFP42Q96MM3 310 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
DDX41-212ENST00000511040 NRDE2Q9H7Z3 1164 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 C17orf75Q9HAS0 396 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 STK17AQ9UEE5 414 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 PARP2Q9UGN5 583 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 REV3LO60673 3130 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 PHLPP2Q6ZVD8 1323 aa15.38■□□□□ 0.05
DDX41-212ENST00000511040 MYO7AQ13402 2215 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 ATG2AQ2TAZ0 1938 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 ARL5CA6NH57 179 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 TBCAO75347 108 aaKnown RBP15.37■□□□□ 0.05
DDX41-212ENST00000511040 DDHD2O94830 711 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 SMTNP53814 917 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 TIGD5Q53EQ6 642 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
DDX41-212ENST00000511040 CCDC73Q6ZRK6 1079 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 HACE1Q8IYU2 909 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 TMEM161BQ8NDZ6 487 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 KCNG4Q8TDN1 519 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 SPIRE2Q8WWL2 714 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 LMAN2LQ9H0V9 348 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 MIOSQ9NXC5 875 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 SPG21Q9NZD8 308 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 DNAJB4Q9UDY4 337 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 CFAP45Q9UL16 551 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 ODF2LQ9ULJ1 636 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 PCDHA7Q9UN72 937 aa15.37■□□□□ 0.05
DDX41-212ENST00000511040 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
DDX41-212ENST00000511040 MYMKA6NI61 221 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
DDX41-212ENST00000511040 SLC11A1P49279 550 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 ALDH7A1P49419 539 aaKnown RBP15.36■□□□□ 0.05
DDX41-212ENST00000511040 SCNN1GP51170 649 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 TFF2Q03403 129 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 STRN3Q13033 797 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 ATL3Q6DD88 541 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 SV2BQ7L1I2 683 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 TMEM173Q86WV6 379 aaPredicted RBP15.36■□□□□ 0.05
DDX41-212ENST00000511040 SLC39A11Q8N1S5 342 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 STAMQ92783 540 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 DHX58Q96C10 678 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 FAM193BQ96PV7 902 aaPredicted RBP15.36■□□□□ 0.05
DDX41-212ENST00000511040 ACO2Q99798 780 aaKnown RBP15.36■□□□□ 0.05
DDX41-212ENST00000511040 ADPGKQ9BRR6 497 aa15.36■□□□□ 0.05
DDX41-212ENST00000511040 NTPCRQ9BSD7 190 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms