RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 DUSP2Q05923 314 aa7.3□□□□□ -1.24
NUP54-209ENST00000510569 MGAT5Q09328 741 aa7.3□□□□□ -1.24
NUP54-209ENST00000510569 C11orf74Q86VG3 221 aa7.3□□□□□ -1.24
NUP54-209ENST00000510569 SYNE4Q8N205 404 aa7.3□□□□□ -1.24
NUP54-209ENST00000510569 EVLQ9UI08 416 aaPredicted RBP7.3□□□□□ -1.24
NUP54-209ENST00000510569 PRSS50Q9UI38 385 aa7.3□□□□□ -1.24
NUP54-209ENST00000510569 SORCS3Q9UPU3 1222 aa7.3□□□□□ -1.24
NUP54-209ENST00000510569 A0A087X0B3 334 aa7.29□□□□□ -1.24
NUP54-209ENST00000510569 GYPEP15421 78 aa7.29□□□□□ -1.24
NUP54-209ENST00000510569 ZFP36P26651 326 aaKnown RBP7.29□□□□□ -1.24
NUP54-209ENST00000510569 MEF2AQ02078 507 aaPredicted RBP7.29□□□□□ -1.24
NUP54-209ENST00000510569 VPS72Q15906 364 aa7.29□□□□□ -1.24
NUP54-209ENST00000510569 LAIR1Q6GTX8 287 aa7.29□□□□□ -1.24
NUP54-209ENST00000510569 MLST8Q9BVC4 326 aa7.29□□□□□ -1.24
NUP54-209ENST00000510569 ENPP3O14638 875 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 RECQL4O94761 1208 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 LTA4HP09960 611 aaKnown RBP7.28□□□□□ -1.24
NUP54-209ENST00000510569 TRIM25Q14258 630 aaKnown RBP7.28□□□□□ -1.24
NUP54-209ENST00000510569 DDB1Q16531 1140 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 GPRIN1Q7Z2K8 1008 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 OR14C36Q8NHC7 312 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 CPT1CQ8TCG5 803 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 SLC5A5Q92911 643 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 NDC1Q9BTX1 674 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 KCNH6Q9H252 994 aa7.28□□□□□ -1.24
NUP54-209ENST00000510569 TMEM127O75204 238 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 NANOS3P60323 173 aaKnown RBP7.27□□□□□ -1.25
NUP54-209ENST00000510569 UBE3CQ15386 1083 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 PLEKHG4Q58EX7 1191 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 LY6G5CQ5SRR4 150 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 BROXQ5VW32 411 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 IQSEC1Q6DN90 963 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 RASSF3Q86WH2 238 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 PROKR1Q8TCW9 393 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 SLC46A2Q9BY10 475 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 EPC1Q9H2F5 836 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 PRDM12Q9H4Q4 367 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 CLCA2Q9UQC9 943 aa7.27□□□□□ -1.25
NUP54-209ENST00000510569 AHRRA9YTQ3 701 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 SCAF4O95104 1147 aaKnown RBP7.26□□□□□ -1.25
NUP54-209ENST00000510569 ABHD16AO95870 558 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 BPIP17213 487 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 C19orf54Q5BKX5 351 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 PITRM1Q5JRX3 1037 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 CCDC62Q6P9F0 684 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 ANO3Q9BYT9 981 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 MAPRE3Q9UPY8 281 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 CDY2AQ9Y6F7 541 aa7.26□□□□□ -1.25
NUP54-209ENST00000510569 GRID2IPA4D2P6 1211 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 PDE8AO60658 829 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 RAB11FIP3O75154 756 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 CLEC2LP0C7M8 214 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 PROZP22891 400 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 DHCR24Q15392 516 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 MBNL2Q5VZF2 373 aaKnown RBP7.25□□□□□ -1.25
NUP54-209ENST00000510569 DRICH1Q6PGQ1 229 aaPredicted RBP7.25□□□□□ -1.25
NUP54-209ENST00000510569 KCNV1Q6PIU1 500 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 LILRA3Q8N6C8 439 aaPredicted RBP7.25□□□□□ -1.25
NUP54-209ENST00000510569 ZNF768Q9H5H4 540 aaKnown RBP7.25□□□□□ -1.25
NUP54-209ENST00000510569 EIF2B4Q9UI10 523 aaKnown RBP7.25□□□□□ -1.25
NUP54-209ENST00000510569 KCNG1Q9UIX4 513 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 HDAC5Q9UQL6 1122 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 CHST2Q9Y4C5 530 aa7.25□□□□□ -1.25
NUP54-209ENST00000510569 GCP02774 474 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 APOBEC3AP31941 199 aaPredicted RBP7.24□□□□□ -1.25
NUP54-209ENST00000510569 PTTG1IPP53801 180 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 PTPAQ15257 358 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 ATP13A4Q4VNC1 1196 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 VRK3Q8IV63 474 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 SNX33Q8WV41 574 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 LEO1Q8WVC0 666 aaPredicted RBP7.24□□□□□ -1.25
NUP54-209ENST00000510569 ZG16BQ96DA0 208 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 MYEOVQ96EZ4 313 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 KCTD10Q9H3F6 313 aa7.24□□□□□ -1.25
NUP54-209ENST00000510569 B5MCH6 92 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 PRAMEF4O60810 478 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 LAG3P18627 525 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 APBA1Q02410 837 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 CSRP2Q16527 193 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 BTNL9Q6UXG8 535 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 XYLT1Q86Y38 959 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 DNAJC10Q8IXB1 793 aa7.23□□□□□ -1.25
NUP54-209ENST00000510569 PAWRQ96IZ0 340 aaKnown RBP7.23□□□□□ -1.25
NUP54-209ENST00000510569 FAM193BQ96PV7 902 aaPredicted RBP7.23□□□□□ -1.25
NUP54-209ENST00000510569 DCLRE1CQ96SD1 692 aaKnown RBP7.23□□□□□ -1.25
NUP54-209ENST00000510569 NOC2LQ9Y3T9 749 aaKnown RBP7.23□□□□□ -1.25
NUP54-209ENST00000510569 GAGE12BA1L429 117 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 PRR5-ARHGAP8B1AHC4 643 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 RHOBTB3O94955 611 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 MYCLP1P12525 358 aaPredicted RBP7.22□□□□□ -1.25
NUP54-209ENST00000510569 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
NUP54-209ENST00000510569 ADRA1BP35368 520 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 FAM189BP81408 668 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 FSTL1Q12841 308 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 PDCD1Q15116 288 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 TIGD2Q4W5G0 525 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 ABHD15Q6UXT9 468 aa7.22□□□□□ -1.25
NUP54-209ENST00000510569 GDF7Q7Z4P5 450 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms