RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 HAUS3Q68CZ6 603 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 CDCA2Q69YH5 1023 aaPredicted RBP19.87■□□□□ 0.77
TPM3-220ENST00000509601 ANKRD54Q6NXT1 300 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 SYCE2Q6PIF2 218 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 URGCPQ8TCY9 931 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 AUTS2Q8WXX7 1259 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 GAD1Q99259 594 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 TMEM175Q9BSA9 504 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 KIF3AQ9Y496 699 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 USP15Q9Y4E8 981 aaPredicted RBP19.87■□□□□ 0.77
TPM3-220ENST00000509601 IRAK3Q9Y616 596 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 FSD2A1L4K1 749 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 ARL5CA6NH57 179 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 LRRIQ4A6NIV6 560 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 PP2D1A8MPX8 630 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 NRP1O14786 923 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 CTSAP10619 480 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 COL9A1P20849 921 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 CDC25AP30304 524 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 PRPHP41219 470 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 FAM187BQ17R55 369 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 MCTP1Q6DN14 999 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 GSTCDQ8NEC7 633 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 SUSD6Q92537 303 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 LRFN3Q9BTN0 628 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 MMTAG2Q9BU76 263 aaKnown RBP19.86■□□□□ 0.77
TPM3-220ENST00000509601 BHMT2Q9H2M3 363 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 FAN1Q9Y2M0 1017 aa19.86■□□□□ 0.77
TPM3-220ENST00000509601 LAD1O00515 517 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 GPR37L1O60883 481 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 RILPL1Q5EBL4 403 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 LLGL2Q6P1M3 1020 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 SLC27A1Q6PCB7 646 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 COLGALT2Q8IYK4 626 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 PRIMPOLQ96LW4 560 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 ZFP42Q96MM3 310 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 DDX19AQ9NUU7 478 aaKnown RBP19.85■□□□□ 0.77
TPM3-220ENST00000509601 PRMT7Q9NVM4 692 aaPredicted RBP19.85■□□□□ 0.77
TPM3-220ENST00000509601 RAPGEFL1Q9UHV5 662 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 GIT1Q9Y2X7 761 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 HCFC2Q9Y5Z7 792 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 STK24Q9Y6E0 443 aa19.85■□□□□ 0.77
TPM3-220ENST00000509601 E9PMD0 336 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 LILRB3O75022 631 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 NPTXRO95502 500 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 EFEMP2O95967 443 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 EDN1P05305 212 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 AKAP5P24588 427 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 DSC1Q08554 894 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 DTHD1Q6ZMT9 781 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 SNX29Q8TEQ0 813 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 FAM193BQ96PV7 902 aaPredicted RBP19.84■□□□□ 0.77
TPM3-220ENST00000509601 APOL6Q9BWW8 343 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 CCDC113Q9H0I3 377 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 NXF3Q9H4D5 531 aaKnown RBP19.84■□□□□ 0.77
TPM3-220ENST00000509601 USP20Q9Y2K6 914 aa19.84■□□□□ 0.77
TPM3-220ENST00000509601 LOC730098B7Z3J9 87 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 MLH1P40692 756 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 NAMPTP43490 491 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 SCNN1GP51170 649 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 ATP2C1P98194 919 aaPredicted RBP19.83■□□□□ 0.77
TPM3-220ENST00000509601 BMS1Q14692 1282 aaKnown RBP19.83■□□□□ 0.77
TPM3-220ENST00000509601 TMEM31Q5JXX7 168 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 KRT79Q5XKE5 535 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 TAS1R1Q7RTX1 841 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 KCNK18Q7Z418 384 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 ZBTB8OSQ8IWT0 167 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 RAB34Q9BZG1 259 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 C2orf40Q9H1Z8 148 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 MARCH5Q9NX47 278 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 DNM3Q9UQ16 869 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 SMC3Q9UQE7 1217 aa19.83■□□□□ 0.77
TPM3-220ENST00000509601 TRIOO75962 3097 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 FAM86C2PA6NEL3 165 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 H3BQV1 296 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 ACKR2O00590 384 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 ALADP13716 330 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 HOXB8P17481 243 aaPredicted RBP19.82■□□□□ 0.76
TPM3-220ENST00000509601 GIT2Q14161 759 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 CBX2Q14781 532 aaPredicted RBP19.82■□□□□ 0.76
TPM3-220ENST00000509601 PTPN14Q15678 1187 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 LARP1BQ659C4 914 aaKnown RBP19.82■□□□□ 0.76
TPM3-220ENST00000509601 RNF135Q8IUD6 432 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 SLC22A17Q8WUG5 538 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 CASP10Q92851 521 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 POP1Q99575 1024 aaKnown RBP19.82■□□□□ 0.76
TPM3-220ENST00000509601 APOL5Q9BWW9 433 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 PHF7Q9BWX1 381 aaPredicted RBP19.82■□□□□ 0.76
TPM3-220ENST00000509601 TRIM6Q9C030 488 aaPredicted RBP19.82■□□□□ 0.76
TPM3-220ENST00000509601 PDZD7Q9H5P4 517 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 KLK14Q9P0G3 267 aa19.82■□□□□ 0.76
TPM3-220ENST00000509601 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.81■□□□□ 0.76
TPM3-220ENST00000509601 DCXO43602 365 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 PRKCBP05771 671 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 SRGAP2BP0DMP2 458 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 OR1G1P47890 313 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 MAPK6Q16659 721 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 RNF168Q8IYW5 571 aaPredicted RBP19.81■□□□□ 0.76
TPM3-220ENST00000509601 DAW1Q8N136 415 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms