RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 MLH1P40692 756 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
CLDND1-219ENST00000508659 UBE3AQ05086 875 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 MCM6Q14566 821 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 LRRC15Q8TF66 581 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 REEP2Q9BRK0 252 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 BLOC1S4Q9NUP1 217 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 LARSQ9P2J5 1176 aaKnown RBP18.67■□□□□ 0.58
CLDND1-219ENST00000508659 STK17AQ9UEE5 414 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 KCNG1Q9UIX4 513 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
CLDND1-219ENST00000508659 NPHP3-ACAD11A0A0J9YXS1 232 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 CARNS1A5YM72 827 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 K7ERI5 159 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 PPP6R2O75170 966 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 TBCAO75347 108 aaKnown RBP18.66■□□□□ 0.58
CLDND1-219ENST00000508659 EDN1P05305 212 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 ALDH7A1P49419 539 aaKnown RBP18.66■□□□□ 0.58
CLDND1-219ENST00000508659 SMTNP53814 917 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 TCEAL5Q5H9L2 206 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 ATF7IP2Q5U623 682 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 APBB1IPQ7Z5R6 666 aaPredicted RBP18.66■□□□□ 0.58
CLDND1-219ENST00000508659 SPPL3Q8TCT6 385 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 PPP2R3CQ969Q6 453 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 TLR9Q9NR96 1032 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 ARHGAP28Q9P2N2 729 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 KANSL3Q9P2N6 904 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 TFIP11Q9UBB9 837 aaKnown RBP18.66■□□□□ 0.58
CLDND1-219ENST00000508659 UNC80Q8N2C7 3258 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 MYO9BQ13459 2157 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 MYH15Q9Y2K3 1946 aa18.66■□□□□ 0.58
CLDND1-219ENST00000508659 PRRC2BQ5JSZ5 2229 aaKnown RBP18.66■□□□□ 0.58
CLDND1-219ENST00000508659 TTLL13PA6NNM8 815 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 SFI1A8K8P3 1242 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 SLC16A4O15374 487 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 FAM13AO94988 1023 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 BCAR1P56945 870 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 DCAF4L1Q3SXM0 396 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 RRAGBQ5VZM2 374 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 ATL3Q6DD88 541 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 KCNG4Q8TDN1 519 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 SPIRE2Q8WWL2 714 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 HLA-CQ95604 372 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 FAM193BQ96PV7 902 aaPredicted RBP18.65■□□□□ 0.58
CLDND1-219ENST00000508659 RPS6KC1Q96S38 1066 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 MRPL4Q9BYD3 311 aaKnown RBP18.65■□□□□ 0.58
CLDND1-219ENST00000508659 TMEM134Q9H6X4 195 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 SPG21Q9NZD8 308 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
CLDND1-219ENST00000508659 COG5Q9UP83 839 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 GIT1Q9Y2X7 761 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 ZMYM2Q9UBW7 1377 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 PRUNE2Q8WUY3 3088 aa18.65■□□□□ 0.58
CLDND1-219ENST00000508659 ARL5CA6NH57 179 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 H0YCG3 227 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 POMCP01189 267 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 AKAP5P24588 427 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 DNAJB1P25685 340 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 STAT6P42226 847 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 PLCB3Q01970 1234 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 KRT17Q04695 432 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 STRN3Q13033 797 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 CAMK1Q14012 370 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 ARSHQ5FYA8 562 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.57
CLDND1-219ENST00000508659 MRPS27Q92552 414 aaKnown RBP18.64■□□□□ 0.57
CLDND1-219ENST00000508659 TMEM169Q96HH4 297 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 GAD1Q99259 594 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 ZHX3Q9H4I2 956 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 PARVGQ9HBI0 331 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 PARP2Q9UGN5 583 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 PUF60Q9UHX1 559 aaKnown RBP18.64■□□□□ 0.57
CLDND1-219ENST00000508659 CFAP45Q9UL16 551 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 LZTS1Q9Y250 596 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 USP20Q9Y2K6 914 aa18.64■□□□□ 0.57
CLDND1-219ENST00000508659 K7ENM7 598 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 INPPL1O15357 1258 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 IRS1P35568 1242 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 DDIT3P35638 169 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 SCNN1GP51170 649 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 AFF1P51825 1210 aaKnown RBP18.63■□□□□ 0.57
CLDND1-219ENST00000508659 AAK1Q2M2I8 961 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 ZNF568Q3ZCX4 644 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 MICAL1Q8TDZ2 1067 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 ZFP42Q96MM3 310 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 NRDE2Q9H7Z3 1164 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 ENTPD7Q9NQZ7 604 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 TNFSF13BQ9Y275 285 aa18.63■□□□□ 0.57
CLDND1-219ENST00000508659 NT5C1B-RDH14C9J2C7 533 aa18.62■□□□□ 0.57
CLDND1-219ENST00000508659 CUTAO60888 179 aa18.62■□□□□ 0.57
CLDND1-219ENST00000508659 BRD1O95696 1058 aa18.62■□□□□ 0.57
CLDND1-219ENST00000508659 ME1P48163 572 aa18.62■□□□□ 0.57
CLDND1-219ENST00000508659 ZNF131P52739 623 aa18.62■□□□□ 0.57
CLDND1-219ENST00000508659 MRPS5P82675 430 aaKnown RBP18.62■□□□□ 0.57
CLDND1-219ENST00000508659 DNM1Q05193 864 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms