RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ELMSAN1Q6PJG2 1045 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 DGLUCYQ7Z3D6 616 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 C1orf210Q8IVY1 113 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 MAML2Q8IZL2 1156 aaPredicted RBP18.42■□□□□ 0.54
SNF8-205ENST00000507302 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 GPR152Q8TDT2 470 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 NT5C3AQ9H0P0 336 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 ZDHHC7Q9NXF8 308 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 CA14Q9ULX7 337 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 SIT1Q9Y3P8 196 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 DOCK6Q96HP0 2047 aa18.42■□□□□ 0.54
SNF8-205ENST00000507302 SPDYE4A6NLX3 237 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 POMCP01189 267 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 GLUD2P49448 558 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 AK2P54819 239 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 PCBP1Q15365 356 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNF8-205ENST00000507302 BMP2KLQ5H9B9 411 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 ZC3H14Q6PJT7 736 aaKnown RBP18.41■□□□□ 0.54
SNF8-205ENST00000507302 KIAA2013Q8IYS2 634 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 SMG7Q92540 1137 aaKnown RBP18.41■□□□□ 0.54
SNF8-205ENST00000507302 RUBCNQ92622 972 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 FAM193BQ96PV7 902 aaPredicted RBP18.41■□□□□ 0.54
SNF8-205ENST00000507302 DDX23Q9BUQ8 820 aaKnown RBP18.41■□□□□ 0.54
SNF8-205ENST00000507302 ARHGEF3Q9NR81 526 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 FNIP2Q9P278 1114 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 CACNA1BQ00975 2339 aa18.41■□□□□ 0.54
SNF8-205ENST00000507302 DDX11L8A8MPP1 907 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 C2CD2LO14523 706 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 TDP2O95551 362 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 NPY5RQ15761 445 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 ZNF528Q3MIS6 628 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 Q6ZUG5 572 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 EXOC8Q8IYI6 725 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 ZNF579Q8NAF0 562 aaKnown RBP18.4■□□□□ 0.54
SNF8-205ENST00000507302 PJA1Q8NG27 643 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 KCNG4Q8TDN1 519 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 PRPF31Q8WWY3 499 aaKnown RBP18.4■□□□□ 0.54
SNF8-205ENST00000507302 RIN2Q8WYP3 895 aaPredicted RBP18.4■□□□□ 0.54
SNF8-205ENST00000507302 BRF1Q92994 677 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 PRKD2Q9BZL6 878 aa18.4■□□□□ 0.54
SNF8-205ENST00000507302 ZFP37Q9Y6Q3 630 aaPredicted RBP18.4■□□□□ 0.54
SNF8-205ENST00000507302 ARL5CA6NH57 179 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 EML1O00423 815 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 DCNP07585 359 aaKnown RBP18.39■□□□□ 0.53
SNF8-205ENST00000507302 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 PPP2R5CQ13362 524 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 PLA2G4FQ68DD2 849 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 DAGLBQ8NCG7 672 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 GSTCDQ8NEC7 633 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNF8-205ENST00000507302 MIOSQ9NXC5 875 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 WRAP73Q9P2S5 460 aaPredicted RBP18.39■□□□□ 0.53
SNF8-205ENST00000507302 VAV3Q9UKW4 847 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 PRG3Q9Y2Y8 225 aaPredicted RBP18.39■□□□□ 0.53
SNF8-205ENST00000507302 IPPQ9Y573 584 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 ZMYM2Q9UBW7 1377 aa18.39■□□□□ 0.53
SNF8-205ENST00000507302 POTEMA6NI47 508 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 F8W810 466 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 TGM5O43548 720 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 GAS2O43903 313 aaKnown RBP18.38■□□□□ 0.53
SNF8-205ENST00000507302 CPA1P15085 419 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 AXLP30530 894 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 RFC5P40937 340 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 QARSP47897 775 aaKnown RBP18.38■□□□□ 0.53
SNF8-205ENST00000507302 NPEPPSP55786 919 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 DCLRE1AQ6PJP8 1040 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
SNF8-205ENST00000507302 FAM177A1Q8N128 213 aaPredicted RBP18.38■□□□□ 0.53
SNF8-205ENST00000507302 PSPC1Q8WXF1 523 aaKnown RBP18.38■□□□□ 0.53
SNF8-205ENST00000507302 SLC7A3Q8WY07 619 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 CCDC51Q96ER9 411 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 NUMBLQ9Y6R0 609 aa18.38■□□□□ 0.53
SNF8-205ENST00000507302 NOTCH4Q99466 2003 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 TPRP12270 2363 aaKnown RBP18.37■□□□□ 0.53
SNF8-205ENST00000507302 STK25O00506 426 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 ASAP2O43150 1006 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 ITGA4P13612 1032 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 AKAP17AQ02040 695 aaKnown RBP18.37■□□□□ 0.53
SNF8-205ENST00000507302 POU5F1BQ06416 359 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 GAD1Q99259 594 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 EIF2AQ9BY44 585 aaKnown RBP18.37■□□□□ 0.53
SNF8-205ENST00000507302 OSBPL6Q9BZF3 934 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 GPR62Q9BZJ7 368 aa18.37■□□□□ 0.53
SNF8-205ENST00000507302 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
SNF8-205ENST00000507302 ACACBO00763 2458 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 TSPAN1O60635 241 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 DKC1O60832 514 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNF8-205ENST00000507302 ZMYND10O75800 440 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 SPATA31D3P0C874 917 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 OR1G1P47890 313 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 PTENP60484 403 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 COL4A3Q01955 1670 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 SPATA31D4Q6ZUB0 917 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms