RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 STAMQ92783 540 aa16.27■□□□□ 0.2
DSP-203ENST00000506617 HVCN1Q96D96 273 aa16.27■□□□□ 0.2
DSP-203ENST00000506617 PRIMPOLQ96LW4 560 aa16.27■□□□□ 0.2
DSP-203ENST00000506617 TGS1Q96RS0 853 aaKnown RBP16.27■□□□□ 0.2
DSP-203ENST00000506617 GAS2L1Q99501 681 aaPredicted RBP16.27■□□□□ 0.2
DSP-203ENST00000506617 AGPAT5Q9NUQ2 364 aa16.27■□□□□ 0.2
DSP-203ENST00000506617 ARHGAP28Q9P2N2 729 aa16.27■□□□□ 0.2
DSP-203ENST00000506617 PCDHB7Q9Y5E2 793 aa16.27■□□□□ 0.2
DSP-203ENST00000506617 LRRIQ4A6NIV6 560 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 RPN1P04843 607 aaKnown RBP16.26■□□□□ 0.19
DSP-203ENST00000506617 IDEP14735 1019 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 PEX3P56589 373 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 ERVK-21P61565 698 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 GTF2BQ00403 316 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 ADGRE1Q14246 886 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 PAN2Q504Q3 1202 aaKnown RBP16.26■□□□□ 0.19
DSP-203ENST00000506617 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 STXBP4Q6ZWJ1 553 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 ZNF720Q7Z2F6 126 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 FIBCD1Q8N539 461 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 TMEM161BQ8NDZ6 487 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 DEPTORQ8TB45 409 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 FIZ1Q96SL8 496 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 C17orf80Q9BSJ5 609 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 FZD8Q9H461 694 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 POLD4Q9HCU8 107 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 KMT5AQ9NQR1 393 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 CHST12Q9NRB3 414 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
DSP-203ENST00000506617 ATG2AQ2TAZ0 1938 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 SFI1A8K8P3 1242 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 ERLIN2O94905 339 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 FGFR1P11362 822 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 FAM189BP81408 668 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 MBTD1Q05BQ5 628 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 COASYQ13057 564 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 BTG3Q14201 252 aaPredicted RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 RBM43Q6ZSC3 357 aaKnown RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 ECHDC2Q86YB7 292 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 CMTR2Q8IYT2 770 aaKnown RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 GDPD5Q8WTR4 605 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 CCDC113Q9H0I3 377 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 ELAC1Q9H777 363 aaKnown RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 PRMT7Q9NVM4 692 aaPredicted RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
DSP-203ENST00000506617 KIAA1468Q9P260 1216 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 PCDHB13Q9Y5F0 798 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 PCDHA5Q9Y5H7 936 aa16.25■□□□□ 0.19
DSP-203ENST00000506617 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 CCDC169A6NNP5 214 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 K7ERI5 159 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 EIF3DO15371 548 aaKnown RBP eCLIP16.24■□□□□ 0.19
DSP-203ENST00000506617 TSPAN1O60635 241 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 PPP1R37O75864 691 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 LINC00271P0C7V0 271 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
DSP-203ENST00000506617 AXLP30530 894 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
DSP-203ENST00000506617 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
DSP-203ENST00000506617 PNOCQ13519 176 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 MAPK6Q16659 721 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 AMHR2Q16671 573 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 COBLL1Q53SF7 1204 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 FAM26FQ5R3K3 315 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 HAUS6Q7Z4H7 955 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 SFR1Q86XK3 245 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 TRIML1Q8N9V2 468 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 SAMD11Q96NU1 681 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 MRPL44Q9H9J2 332 aaKnown RBP16.24■□□□□ 0.19
DSP-203ENST00000506617 RNF19AQ9NV58 838 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 EXOC1Q9NV70 894 aa16.24■□□□□ 0.19
DSP-203ENST00000506617 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
DSP-203ENST00000506617 UBE4BO95155 1302 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 TBKBP1A7MCY6 615 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 ACKR2O00590 384 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 B4GALT5O43286 388 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 KIF20AO95235 890 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 PRR29P0C7W0 189 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 IGFBP4P22692 258 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 HOXA11P31270 313 aaPredicted RBP16.23■□□□□ 0.19
DSP-203ENST00000506617 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 KMT5BQ4FZB7 885 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 EPC2Q52LR7 807 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 CCDC183Q5T5S1 534 aa16.23■□□□□ 0.19
DSP-203ENST00000506617 EPM2AIP1Q7L775 607 aaPredicted RBP16.23■□□□□ 0.19
DSP-203ENST00000506617 ZNF598Q86UK7 904 aaKnown RBP16.23■□□□□ 0.19
DSP-203ENST00000506617 TMEM192Q8IY95 271 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms