RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 C5orf67F2Z3F1 127 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 NLRP12P59046 1061 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 C1orf220Q5T0J3 134 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 RPUSD2Q8IZ73 545 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 BLZF1Q9H2G9 400 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 REV3LO60673 3130 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 SCN1AP35498 2009 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 ANKRD63C9JTQ0 380 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 TOM1L1O75674 476 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 DGKIO75912 1065 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 PRKCBP05771 671 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 MAGEA10P43363 369 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 ATN1P54259 1190 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 IGBP1P78318 339 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 DSC1Q08554 894 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 KCNA1Q09470 495 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 NFKBIBQ15653 356 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 KNOP1Q1ED39 458 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 SLC27A1Q6PCB7 646 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 MPZL3Q6UWV2 235 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 ECHDC2Q86YB7 292 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 C7orf61Q8IZ16 206 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 PDILTQ8N807 584 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 IFT74Q96LB3 600 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 CASD1Q96PB1 797 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 TYW1Q9NV66 732 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 B4GALT5O43286 388 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 CSF2RAP15509 400 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 CD300LGQ6UXG3 332 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 MRPL4Q9BYD3 311 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 CDT1Q9H211 546 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 PLEKHA5Q9HAU0 1116 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 HELZP42694 1942 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 EVI5O60447 810 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 SKIP12755 728 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 CD52P31358 61 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 PRCPP42785 496 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 NCAPHQ15003 741 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 GPR153Q6NV75 609 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 APTXQ7Z2E3 356 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 SNX27Q96L92 541 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 PPP1R10Q96QC0 940 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 ACCSQ96QU6 501 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM161AQ9NX61 479 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 AKT3Q9Y243 479 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 PCDHB13Q9Y5F0 798 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 DENND3A2RUS2 1198 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 SLC16A4O15374 487 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 LRRC63Q05C16 580 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 LRIT3Q3SXY7 679 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 ZC2HC1CQ53FD0 456 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 NOTUMQ6P988 496 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 SLC9A7Q96T83 725 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 KIFC3Q9BVG8 833 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 IFIH1Q9BYX4 1025 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 RWDD2AQ9UIY3 292 aa9.1□□□□□ -0.95
CDC42SE2-208ENST00000505065 TTC26A0AVF1 554 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM189-UBE2V1I3L0A0 370 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 SLC16A3O15427 465 aaKnown RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 FAM13AO94988 1023 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 LETM1O95202 739 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 NPTXRO95502 500 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 AARSP49588 968 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 CDKAL1Q5VV42 579 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 SLC24A5Q71RS6 500 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 IRF2BP1Q8IU81 584 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 SEPT8Q92599 483 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 COL4A2P08572 1712 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 KINO60870 393 aaKnown RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 SMC2O95347 1197 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 SMTNP53814 917 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 PMS1P54277 932 aaKnown RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 PAK2Q13177 524 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 CLLU1OSQ5K130 101 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 AGMOQ6ZNB7 445 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 DYMQ7RTS9 669 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 ZBTB8OSQ8IWT0 167 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 MLKLQ8NB16 471 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 SCLYQ96I15 445 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 NUP62CLQ9H1M0 184 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 CWH43Q9H720 699 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 HOOK1Q9UJC3 728 aaKnown RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM265A0A087WTH1 108 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 ZNF18P17022 549 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 CYP3A5P20815 502 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 MAPK6Q16659 721 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 ATF7IP2Q5U623 682 aa9.09□□□□□ -0.95
CDC42SE2-208ENST00000505065 EEF1DP3Q658K8 133 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms