RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 DENND3A2RUS2 1198 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 SFI1A8K8P3 1242 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 CSPG5O95196 566 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 GTF2F1P35269 517 aaKnown RBP eCLIP18.6■□□□□ 0.57
SYNE4-207ENST00000505054 NHLH1Q02575 133 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 PPP2R5AQ15172 486 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 HERC4Q5GLZ8 1057 aaPredicted RBP18.6■□□□□ 0.57
SYNE4-207ENST00000505054 ADALQ6DHV7 355 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 FAM43BQ6ZT52 329 aaPredicted RBP18.6■□□□□ 0.57
SYNE4-207ENST00000505054 CRIPAKQ8N1N5 446 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 IFT74Q96LB3 600 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 IGFLR1Q9H665 355 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 ALG13Q9NP73 1137 aaKnown RBP18.6■□□□□ 0.57
SYNE4-207ENST00000505054 RGS18Q9NS28 235 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 AGPAT5Q9NUQ2 364 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
SYNE4-207ENST00000505054 TECTAO75443 2155 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 WDFY4Q6ZS81 3184 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 C9IYK1 514 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 INO80B-WBP1J3KQ70 363 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 LINC01565O15544 149 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 TSPAN1O60635 241 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 STAG3L1P0CL83 205 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 NPTX2P47972 431 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 NDUFV1P49821 464 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 PEX3P56589 373 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 ADAM15Q13444 863 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 CAMK1Q14012 370 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 GIT2Q14161 759 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 HFE2Q6ZVN8 426 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 DEPTORQ8TB45 409 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 DHX58Q96C10 678 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 FBXL18Q96ME1 805 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 CCDC113Q9H0I3 377 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 FAM13BQ9NYF5 915 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 MUTYHQ9UIF7 546 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 ODF2LQ9ULJ1 636 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 PIN4Q9Y237 131 aaKnown RBP18.59■□□□□ 0.57
SYNE4-207ENST00000505054 TRIOO75962 3097 aa18.59■□□□□ 0.57
SYNE4-207ENST00000505054 MYMKA6NI61 221 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 POLR2DO15514 142 aaKnown RBP18.58■□□□□ 0.56
SYNE4-207ENST00000505054 ITGB1P05556 798 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 PLS3P13797 630 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 CMA1P23946 247 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 HOXA11P31270 313 aaPredicted RBP18.58■□□□□ 0.56
SYNE4-207ENST00000505054 SARSP49591 514 aaKnown RBP18.58■□□□□ 0.56
SYNE4-207ENST00000505054 MRE11P49959 708 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 FAM189BP81408 668 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 DMP1Q13316 513 aaPredicted RBP18.58■□□□□ 0.56
SYNE4-207ENST00000505054 SLC24A5Q71RS6 500 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 SV2BQ7L1I2 683 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 ZBTB8OSQ8IWT0 167 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 MSLNLQ96KJ4 702 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 IPO9Q96P70 1041 aaKnown RBP18.58■□□□□ 0.56
SYNE4-207ENST00000505054 C2orf40Q9H1Z8 148 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 FZD8Q9H461 694 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 C17orf75Q9HAS0 396 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 CHST12Q9NRB3 414 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 C1orf112Q9NSG2 853 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 KCNH3Q9ULD8 1083 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 HPSEQ9Y251 543 aa18.58■□□□□ 0.56
SYNE4-207ENST00000505054 A0A1B0GVL5 298 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 A0A1W2PQ27 194 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 A0A1W2PQ64 194 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 A0A1W2PQD8 194 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 B4GALT5O43286 388 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 ERLIN2O94905 339 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 EDN1P05305 212 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 KRT18P05783 430 aaKnown RBP18.57■□□□□ 0.56
SYNE4-207ENST00000505054 PFKFB1P16118 471 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 ZSCAN20P17040 1043 aaPredicted RBP18.57■□□□□ 0.56
SYNE4-207ENST00000505054 ZNF131P52739 623 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 PCBP1Q15365 356 aaKnown RBP eCLIP18.57■□□□□ 0.56
SYNE4-207ENST00000505054 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 IQUBQ8NA54 791 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 SPIRE2Q8WWL2 714 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 MFSD14AQ96MC6 490 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 CUEDC2Q9H467 287 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 ARHGAP28Q9P2N2 729 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 TCHHQ07283 1943 aa18.57■□□□□ 0.56
SYNE4-207ENST00000505054 FAM237AA0A1B0GTK4 181 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 TTLL13PA6NNM8 815 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 CCDC169A6NNP5 214 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 PRKCBP05771 671 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 IBSPP21815 317 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-207ENST00000505054 DNAJB1P25685 340 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 FAM187BQ17R55 369 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 PAN2Q504Q3 1202 aaKnown RBP18.56■□□□□ 0.56
SYNE4-207ENST00000505054 DYMQ7RTS9 669 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 ADGRD2Q7Z7M1 963 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 EFHBQ8N7U6 833 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 KLHL23Q8NBE8 558 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 SMRP1Q8NCR6 262 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 SPPL3Q8TCT6 385 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 DDX12PQ92771 950 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 STAMQ92783 540 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 DNAJC19Q96DA6 116 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 CPB2Q96IY4 423 aa18.56■□□□□ 0.56
SYNE4-207ENST00000505054 NTPCRQ9BSD7 190 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms