RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 DDHD2O94830 711 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 SLC11A1P49279 550 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 COASYQ13057 564 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 SMAD2Q15796 467 aaKnown RBP28.04■■■□□ 2.08
PVT1-201ENST00000504719 FAM187BQ17R55 369 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 GJD3Q8N144 294 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 VN1R2Q8NFZ6 395 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 MMTAG2Q9BU76 263 aaKnown RBP28.04■■■□□ 2.08
PVT1-201ENST00000504719 C2orf40Q9H1Z8 148 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 FZD8Q9H461 694 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 PRKAG3Q9UGI9 489 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 BARX2Q9UMQ3 279 aaPredicted RBP28.04■■■□□ 2.08
PVT1-201ENST00000504719 HES2Q9Y543 173 aa28.04■■■□□ 2.08
PVT1-201ENST00000504719 A0A1B0GUA9 196 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 INPPL1O15357 1258 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 EYA4O95677 639 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 CDC25AP30304 524 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 NAMPTP43490 491 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 RESTQ13127 1097 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 KCNC3Q14003 757 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 SMC1AQ14683 1233 aaKnown RBP28.03■■■□□ 2.08
PVT1-201ENST00000504719 SLC27A1Q6PCB7 646 aa28.03■■■□□ 2.08
PVT1-201ENST00000504719 BCL7CQ8WUZ0 217 aaPredicted RBP28.03■■■□□ 2.08
PVT1-201ENST00000504719 TRIM6Q9C030 488 aaPredicted RBP28.03■■■□□ 2.08
PVT1-201ENST00000504719 E9PMD0 336 aa28.02■■■□□ 2.08
PVT1-201ENST00000504719 POMCP01189 267 aa28.02■■■□□ 2.08
PVT1-201ENST00000504719 RBM10P98175 930 aaKnown RBP28.02■■■□□ 2.08
PVT1-201ENST00000504719 DDX53Q86TM3 631 aaKnown RBP28.02■■■□□ 2.08
PVT1-201ENST00000504719 CDR2LQ86X02 465 aaPredicted RBP28.02■■■□□ 2.08
PVT1-201ENST00000504719 MRPL43Q8N983 215 aaKnown RBP28.02■■■□□ 2.08
PVT1-201ENST00000504719 FAM193BQ96PV7 902 aaPredicted RBP28.02■■■□□ 2.08
PVT1-201ENST00000504719 TMEM175Q9BSA9 504 aa28.02■■■□□ 2.08
PVT1-201ENST00000504719 POLD4Q9HCU8 107 aa28.02■■■□□ 2.08
PVT1-201ENST00000504719 DNM3Q9UQ16 869 aa28.02■■■□□ 2.08
PVT1-201ENST00000504719 C2orf71A6NGG8 1288 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 NPTXRO95502 500 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 PPP2R5AQ15172 486 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 TMEM184AQ6ZMB5 413 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 VPS52Q8N1B4 723 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 SMRP1Q8NCR6 262 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 KIFAP3Q92845 792 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 KHSRPQ92945 711 aaKnown RBP eCLIP28.01■■■□□ 2.07
PVT1-201ENST00000504719 GAD1Q99259 594 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 ZBP1Q9H171 429 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 NXF3Q9H4D5 531 aaKnown RBP28.01■■■□□ 2.07
PVT1-201ENST00000504719 MIOSQ9NXC5 875 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 GIT1Q9Y2X7 761 aa28.01■■■□□ 2.07
PVT1-201ENST00000504719 ARL5CA6NH57 179 aa28■■■□□ 2.07
PVT1-201ENST00000504719 ALDH2P05091 517 aa28■■■□□ 2.07
PVT1-201ENST00000504719 SSTR3P32745 418 aaPredicted RBP28■■■□□ 2.07
PVT1-201ENST00000504719 MLH1P40692 756 aa28■■■□□ 2.07
PVT1-201ENST00000504719 ZP2Q05996 745 aa28■■■□□ 2.07
PVT1-201ENST00000504719 BMS1Q14692 1282 aaKnown RBP28■■■□□ 2.07
PVT1-201ENST00000504719 ARL6IP4Q66PJ3 421 aaKnown RBP28■■■□□ 2.07
PVT1-201ENST00000504719 ADHFE1Q8IWW8 467 aa28■■■□□ 2.07
PVT1-201ENST00000504719 HACE1Q8IYU2 909 aa28■■■□□ 2.07
PVT1-201ENST00000504719 DEPTORQ8TB45 409 aa28■■■□□ 2.07
PVT1-201ENST00000504719 IFT74Q96LB3 600 aa28■■■□□ 2.07
PVT1-201ENST00000504719 APOL6Q9BWW8 343 aa28■■■□□ 2.07
PVT1-201ENST00000504719 CCDC113Q9H0I3 377 aa28■■■□□ 2.07
PVT1-201ENST00000504719 C19orf67A6NJJ6 358 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 TTLL13PA6NNM8 815 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 CXCL14O95715 111 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 MAPK6Q16659 721 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 FAM173BQ6P4H8 233 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 KCNK18Q7Z418 384 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 COLGALT2Q8IYK4 626 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 EPHX3Q9H6B9 360 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 FAN1Q9Y2M0 1017 aa27.99■■■□□ 2.07
PVT1-201ENST00000504719 VWA3AA6NCI4 1184 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 ACKR2O00590 384 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 NRP1O14786 923 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 PRKCBP05771 671 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 CTSAP10619 480 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 HYIQ5T013 277 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 ZFP42Q96MM3 310 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 VN1R3Q9BXE9 311 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 ZSCAN16Q9H4T2 348 aaPredicted RBP27.98■■■□□ 2.07
PVT1-201ENST00000504719 PDZD7Q9H5P4 517 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 IRAK3Q9Y616 596 aa27.98■■■□□ 2.07
PVT1-201ENST00000504719 N4BP3O15049 544 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 SRGAP2BP0DMP2 458 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 AKAP5P24588 427 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 SCNN1GP51170 649 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 PRPF4BQ13523 1007 aaKnown RBP27.97■■■□□ 2.07
PVT1-201ENST00000504719 SF3A1Q15459 793 aaKnown RBP27.97■■■□□ 2.07
PVT1-201ENST00000504719 RINT1Q6NUQ1 792 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 LLGL2Q6P1M3 1020 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 PNMA5Q96PV4 448 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 KIFC3Q9BVG8 833 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 ZMYM2Q9UBW7 1377 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 MYH11P35749 1972 aa27.97■■■□□ 2.07
PVT1-201ENST00000504719 C5orf42Q9H799 3197 aa27.96■■■□□ 2.07
PVT1-201ENST00000504719 CLASP2O75122 1294 aaKnown RBP27.96■■■□□ 2.07
PVT1-201ENST00000504719 BMP15O95972 392 aa27.96■■■□□ 2.07
PVT1-201ENST00000504719 EDN1P05305 212 aa27.96■■■□□ 2.07
PVT1-201ENST00000504719 CA8P35219 290 aa27.96■■■□□ 2.07
PVT1-201ENST00000504719 DSC1Q08554 894 aa27.96■■■□□ 2.07
PVT1-201ENST00000504719 GIT2Q14161 759 aa27.96■■■□□ 2.07
PVT1-201ENST00000504719 ANKRD54Q6NXT1 300 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms