RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CCNCP24863 283 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 HOXA6P31267 233 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 VSNL1P62760 191 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 QPCTQ16769 361 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 C6orf183Q5T699 404 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR66Q8TBY9 1149 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP1R14BQ96C90 147 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CCT7Q99832 543 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 USP44Q9H0E7 712 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 RNF39Q9H2S5 420 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CNNM2Q9H8M5 875 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 C6orf50Q9HD87 102 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 LRRC4BQ9NT99 713 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CEP72Q9P209 647 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CTTNBP2NLQ9P2B4 639 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 DMGDHQ9UI17 866 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 HPCAL4Q9UM19 191 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PCDHA7Q9UN72 937 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP2R2CQ9Y2T4 447 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CLIC4Q9Y696 253 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 HAT1O14929 419 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 RNF40O75150 1001 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 BMP15O95972 392 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ATP1A3P13637 1013 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 COL11A2P13942 1736 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT15P19012 456 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 TNFAIP3P21580 790 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 TAF1P21675 1872 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ADCY8P40145 1251 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PTGER2P43116 358 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PDE6CP51160 858 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 HPCAP84074 193 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 KLHL30Q0D2K2 578 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PAK1Q13153 545 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CASP8Q14790 479 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 GRIK5Q16478 980 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 MAP7D1Q3KQU3 841 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKDD1AQ495B1 522 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 RILPL1Q5EBL4 403 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR45BQ5MNZ6 344 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 KLHDC7AQ5VTJ3 777 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP2R2DQ66LE6 453 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 Q6ZNX1 250 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SV2BQ7L1I2 683 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 DGLUCYQ7Z3D6 616 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 MRPL10Q7Z7H8 261 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CCNJLQ8IV13 435 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 BRSK2Q8IWQ3 736 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC105Q8IYK2 499 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SLC35F6Q8N357 371 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ARL6IP6Q8N6S5 226 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 LINC00116Q8NCU8 138 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PPFIBP2Q8ND30 876 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 STK32AQ8WU08 396 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 NELFBQ8WX92 580 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 STMN2Q93045 179 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 LPPQ93052 612 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 NAP1L3Q99457 506 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 TSC22D3Q99576 134 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 IFIH1Q9BYX4 1025 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 C12orf10Q9HB07 376 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 GPHNQ9NQX3 736 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 RHBDL2Q9NX52 303 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 NKX1-2Q9UD57 310 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SAR1BQ9Y6B6 198 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC169A6NNP5 214 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 E7EWF7 191 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 KCNK3O14649 394 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 BACH1O14867 736 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ATP2A1O14983 1001 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 KDM1AO60341 852 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SORBS3O60504 671 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 NPM3O75607 178 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 RNASEH2AO75792 299 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 DNAJC8O75937 253 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 APBB3O95704 486 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 HLA-DOAP06340 250 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 GTF2H1P32780 548 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 LIFRP42702 1097 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF135P52742 658 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PEX3P56589 373 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PDE1BQ01064 536 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CNPY1Q3B7I2 92 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC152Q4G0S7 254 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 EAPPQ56P03 285 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 TTC38Q5R3I4 469 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 GKAP1Q5VSY0 366 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SLFN13Q68D06 897 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SNRNP48Q6IEG0 339 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 POTEEQ6S8J3 1075 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 B4GALNT4Q76KP1 1039 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM83AQ86UY5 434 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 SPATA2LQ8IUW3 424 aaPredicted RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 MIPOL1Q8TD10 442 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 ACMSDQ8TDX5 336 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 UCMAQ8WVF2 138 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 UTP4Q969X6 686 aaKnown RBP3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 DTNBP1Q96EV8 351 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 CEP95Q96GE4 821 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms