RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	NME8	Q8N427	588 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	DNAJB3	Q8WWF6	145 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	WNT8B	Q93098	351 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	BORCS6	Q96GS4	357 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	PDLIM2	Q96JY6	352 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	CNOT6L	Q96LI5	555 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	NLRP4	Q96MN2	994 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	GLT1D1	Q96MS3	346 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	CBWD1	Q9BRT8	395 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	MKNK1	Q9BUB5	465 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	INTS13	Q9NVM9	706 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394		A0A0U1RQG5	324 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394		A0A1B0GTH6	734 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	KBTBD13	C9JR72	458 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	ACKR2	O00590	384 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	CETN3	O15182	167 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	SLC16A3	O15427	465 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	AKAP3	O75969	853 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	PRKCB	P05771	671 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	IQCF3	P0C7M6	154 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	GART	P22102	1010 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	PROZ	P22891	400 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	RPL13	P26373	211 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	CASP4	P49662	377 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	CDK7	P50613	346 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	ZNF75D	P51815	510 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	NLRP11	P59045	1033 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	STRN3	Q13033	797 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	MAPK6	Q16659	721 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	TRIM71	Q2Q1W2	868 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	ZPBP2	Q6X784	338 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	FAM114A1	Q8IWE2	563 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	SYCP3	Q8IZU3	236 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	DHX38	Q92620	1227 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	EEF2KMT	Q96G04	330 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	ZNF668	Q96K58	619 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	FBXL18	Q96ME1	805 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	ACO2	Q99798	780 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	SEZ6L	Q9BYH1	1024 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	HAPLN2	Q9GZV7	340 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	CDHR5	Q9HBB8	845 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	PTPRH	Q9HD43	1115 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	PRDM10	Q9NQV6	1147 aa		13.3	□□□□□ -0.28
MATR3-231	ENST00000502394	ARVCF	O00192	962 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	MAPK13	O15264	365 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	SGPL1	O95470	568 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	ADCY5	O95622	1261 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	GNA14	O95837	355 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	RPLP2	P05387	115 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	COPB1	P53618	953 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	MGAT3	Q09327	533 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	PTK7	Q13308	1070 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	KIZ	Q2M2Z5	673 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	FAM47C	Q5HY64	1035 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	TRIM59	Q8IWR1	403 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	U2AF1L4	Q8WU68	220 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	MRFAP1L1	Q96HT8	127 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	PRIMPOL	Q96LW4	560 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	TARS2	Q9BW92	718 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	MRPL4	Q9BYD3	311 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	STARD7	Q9NQZ5	370 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	HSPBP1	Q9NZL4	362 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	IFNK	Q9P0W0	207 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	USP20	Q9Y2K6	914 aa		13.29	□□□□□ -0.28
MATR3-231	ENST00000502394	INO80B-WBP1	J3KQ70	363 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	HNRNPDL	O14979	420 aa	Known RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	DARS	P14868	501 aa	Known RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	CDK11B	P21127	795 aa	Known RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	CDC25B	P30305	580 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	LIG4	P49917	911 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	MRPS6	P82932	125 aa	Known RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	RBL2	Q08999	1139 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	NR1I3	Q14994	352 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	PTGIS	Q16647	500 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	MIIP	Q5JXC2	388 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	ARMCX5	Q6P1M9	558 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	TSHZ1	Q6ZSZ6	1077 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	FRMD5	Q7Z6J6	570 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	XXYLT1	Q8NBI6	393 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	ZSWIM2	Q8NEG5	633 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	TMEM40	Q8WWA1	233 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	NLRP7	Q8WX94	980 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	ZBTB45	Q96K62	511 aa	Predicted RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	PPP1R16B	Q96T49	567 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	TRIM5	Q9C035	493 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	INO80B	Q9C086	356 aa	Predicted RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	XPO4	Q9C0E2	1151 aa	Known RBP	13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	PLSCR2	Q9NRY7	297 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	TAB2	Q9NYJ8	693 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	CNTNAP2	Q9UHC6	1331 aa		13.28	□□□□□ -0.28
MATR3-231	ENST00000502394	BRCA2	P51587	3418 aa		13.27	□□□□□ -0.28
MATR3-231	ENST00000502394		A0A0B4J269	797 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	KIAA0391	O15091	583 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	B4GALT5	O43286	388 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	FAM189A1	O60320	539 aa		13.27	□□□□□ -0.29
MATR3-231	ENST00000502394	TSPAN1	O60635	241 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms