RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CENPHQ9H3R5 247 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 TBC1D22BQ9NU19 505 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 NOCTQ9UK39 431 aaKnown RBP10.64□□□□□ -0.71
CLIP1-204ENST00000501271 ANKRD63C9JTQ0 380 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 MYO1FO00160 1098 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 MAPK13O15264 365 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 EGFRP00533 1210 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 MYZAPP0CAP1 466 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 DPEP1P16444 411 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 DR1Q01658 176 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 MAP2K1Q02750 393 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-204ENST00000501271 XKR9Q5GH70 373 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 FAM102BQ5T8I3 360 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 TEPSINQ96N21 525 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 KIAA1683Q9H0B3 1180 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 MYOZ2Q9NPC6 264 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 STK32BQ9NY57 414 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 GOLGA6L10A6NI86 522 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 A6NNZ2 444 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TMEM110-MUSTN1A8MSY1 372 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 EBAG9O00559 213 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 NDUFAB1O14561 156 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 CYP26A1O43174 497 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 HPDP32754 393 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 PSMC5P62195 406 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 GPC5P78333 572 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 EN1Q05925 392 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 DHX9Q08211 1270 aaKnown RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 SNRNP35Q16560 246 aaKnown RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TUBB8Q3ZCM7 444 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 SLC47A2Q86VL8 602 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 FAM71AQ8IYT1 594 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 PPM1KQ8N3J5 372 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TMEM161BQ8NDZ6 487 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 GLG1Q92896 1179 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 RMDN3Q96TC7 470 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 PXMP2Q9NR77 195 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 PFASO15067 1338 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 GOLGA6L10A0A0M3HER8 536 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TESPA1A2RU30 521 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 PMM2O15305 246 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 RTN2O75298 545 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 MMEP08473 750 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 MDH1P40925 334 aaKnown RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 MAGEA9P43362 315 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 SOX10P56693 466 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 MTMR2Q13614 643 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 MTMR3Q13615 1198 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TCEAL1Q15170 157 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 DUPD1Q68J44 220 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 ANO5Q75V66 913 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 CPNE8Q86YQ8 564 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 ZDHHC14Q8IZN3 488 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 BSNDQ8WZ55 320 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 ELMO3Q96BJ8 720 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 CCDC127Q96BQ5 260 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 NAP1L3Q99457 506 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 ZSWIM1Q9BR11 485 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TIPINQ9BVW5 301 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 RAB17Q9H0T7 212 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TOPORSQ9NS56 1045 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-204ENST00000501271 TBX20Q9UMR3 447 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 USP20Q9Y2K6 914 aa10.63□□□□□ -0.71
CLIP1-204ENST00000501271 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 RLFQ13129 1914 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 CCDC169A6NNP5 214 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 COMTP21964 271 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 NPTX2P47972 431 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 JAK3P52333 1124 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 SNRPFP62306 86 aaKnown RBP10.62□□□□□ -0.71
CLIP1-204ENST00000501271 FMO1Q01740 532 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 PPARDQ03181 441 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 MESDQ14696 234 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 PTGISQ16647 500 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 RNF207Q6ZRF8 634 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 JAMLQ86YT9 394 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 MAP4K3Q8IVH8 894 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 SHC3Q92529 594 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 C18orf8Q96DM3 657 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 BTBD6Q96KE9 485 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 FMO2Q99518 471 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 ERP44Q9BS26 406 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 TXLNGYQ9BZA5 131 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 EPN3Q9H201 632 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 TMEM51Q9NW97 253 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 FAM169AQ9Y6X4 670 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 DOCK1Q14185 1865 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 UTRNP46939 3433 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 DENND3A2RUS2 1198 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 MIF4GDA9UHW6 222 aaKnown RBP10.62□□□□□ -0.71
CLIP1-204ENST00000501271 PPFIA2O75334 1257 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms