RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MYH11P35749 1972 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 STAT1P42224 750 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 PTENP60484 403 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 HS2ST1Q7LGA3 356 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 GPC2Q8N158 579 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 SLC35G2Q8TBE7 412 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 TEKT3Q9BXF9 490 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 KDM4CQ9H3R0 1056 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 AGPAT3Q9NRZ7 376 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 TTC7AQ9ULT0 858 aaPredicted RBP17.68■□□□□ 0.42
COL6A1-206ENST00000498614 IPO5O00410 1097 aaKnown RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 FERP16591 822 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ELF1P32519 619 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ZNF131P52739 623 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 EIF3BP55884 814 aaKnown RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 DUPD1Q68J44 220 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 GLYCTKQ8IVS8 523 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 SLC30A5Q8TAD4 765 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 GLG1Q92896 1179 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ZNF317Q96PQ6 595 aaPredicted RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 TACO1Q9BSH4 297 aaKnown RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 DNAJC12Q9UKB3 198 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ODF2LQ9ULJ1 636 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 FRMD4BQ9Y2L6 1034 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 DNAJC8O75937 253 aaPredicted RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 GHRP10912 638 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 CHN1P15882 459 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ZNF280AP59817 542 aaPredicted RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 DR1Q01658 176 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ZNF211Q13398 564 aaPredicted RBP17.67■□□□□ 0.42
COL6A1-206ENST00000498614 NFIL3Q16649 462 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 CENPTQ96BT3 561 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 AGBL1Q96MI9 1066 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 RAB17Q9H0T7 212 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 SEL1LQ9UBV2 794 aa17.67■□□□□ 0.42
COL6A1-206ENST00000498614 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 HIP1RO75146 1068 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 ABCB4P21439 1286 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 SOX5P35711 763 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 E2F5Q15329 346 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 HOOK3Q86VS8 718 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 CCDC50Q8IVM0 306 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 CCDC197Q8NCU1 140 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 P3H4Q92791 437 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 N4BP2L2Q92802 583 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 SELENOSQ9BQE4 189 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 ERP44Q9BS26 406 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 ADAM7Q9H2U9 754 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 GPRC5DQ9NZD1 345 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 DICER1Q9UPY3 1922 aaKnown RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 NCANO14594 1321 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 CCT8L1PA6NM43 557 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 MMEP08473 750 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 NF2P35240 595 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 PMS2P54278 862 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 UBAP2Q5T6F2 1119 aaKnown RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 STXBP4Q6ZWJ1 553 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 FAM160B2Q86V87 743 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 SYCP3Q8IZU3 236 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 RNF25Q96BH1 459 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 MKNK1Q9BUB5 465 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 DMAC2Q9NW81 257 aa17.66■□□□□ 0.42
COL6A1-206ENST00000498614 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-206ENST00000498614 UBE4BO95155 1302 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 TLDC2A0PJX2 215 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 SMIM23A6NLE4 172 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 ITGB5P18084 799 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 PLTPP55058 493 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 PPATQ06203 517 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 SPDYCQ5MJ68 293 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 B3GNT9Q6UX72 402 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 DAW1Q8N136 415 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 MAGEC3Q8TD91 643 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 ATXN2LQ8WWM7 1075 aaKnown RBP17.65■□□□□ 0.42
COL6A1-206ENST00000498614 RFFLQ8WZ73 363 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 ARHGEF26Q96DR7 871 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 INTS2Q9H0H0 1204 aaKnown RBP17.65■□□□□ 0.42
COL6A1-206ENST00000498614 SNX24Q9Y343 169 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 DAAM1Q9Y4D1 1078 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 MGRN1O60291 552 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 EXOC3O60645 756 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 NUDT17P0C025 328 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-206ENST00000498614 IFI35P80217 286 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-206ENST00000498614 MAPK7Q13164 816 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 ARHGAP44Q17R89 818 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 ZDHHC24Q6UX98 284 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
COL6A1-206ENST00000498614 STK33Q9BYT3 514 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms