RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 YEATS4O95619 227 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 PLS3P13797 630 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-213ENST00000498495 KRT17Q04695 432 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 ARSHQ5FYA8 562 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 CCDC73Q6ZRK6 1079 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 MICAL1Q8TDZ2 1067 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 APOL6Q9BWW8 343 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 NSUN3Q9H649 340 aaKnown RBP14.1□□□□□ -0.15
HSPG2-213ENST00000498495 TBC1D13Q9NVG8 400 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 LARSQ9P2J5 1176 aaKnown RBP14.1□□□□□ -0.15
HSPG2-213ENST00000498495 PARP2Q9UGN5 583 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 PUF60Q9UHX1 559 aaKnown RBP14.1□□□□□ -0.15
HSPG2-213ENST00000498495 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 USP20Q9Y2K6 914 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 GIT1Q9Y2X7 761 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 HES2Q9Y543 173 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 PHLPP2Q6ZVD8 1323 aa14.1□□□□□ -0.15
HSPG2-213ENST00000498495 CARNS1A5YM72 827 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 SLC16A4O15374 487 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 FAM13AO94988 1023 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 POMCP01189 267 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 ALDH2P05091 517 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 PPM1AP35813 382 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 BCAR1P56945 870 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 PLCB3Q01970 1234 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 UBE3AQ05086 875 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 GIT2Q14161 759 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 NT5DC1Q5TFE4 455 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 ATF7IP2Q5U623 682 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
HSPG2-213ENST00000498495 MYCT1Q8N699 235 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 LRRC15Q8TF66 581 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 SPIRE2Q8WWL2 714 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 GAD1Q99259 594 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 GBP3Q9H0R5 595 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 ZHX3Q9H4I2 956 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 PDZD7Q9H5P4 517 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 NRDE2Q9H7Z3 1164 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 SPG21Q9NZD8 308 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 STK17AQ9UEE5 414 aa14.09□□□□□ -0.15
HSPG2-213ENST00000498495 CDH23Q9H251 3354 aa14.08□□□□□ -0.15
HSPG2-213ENST00000498495 NT5C1B-RDH14C9J2C7 533 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 H0YCG3 227 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 CUTAO60888 179 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 BRD1O95696 1058 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 AKAP5P24588 427 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 DNAJB1P25685 340 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 PBX3P40426 434 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 AFF1P51825 1210 aaKnown RBP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 DNM1Q05193 864 aaKnown RBP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 STRN3Q13033 797 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 CAMK1Q14012 370 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 TCEAL5Q5H9L2 206 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 KCNG4Q8TDN1 519 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 ATXN2LQ8WWM7 1075 aaKnown RBP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 MRPS27Q92552 414 aaKnown RBP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 HLA-CQ95604 372 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 REEP2Q9BRK0 252 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 TCHPQ9BT92 498 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 MRPL4Q9BYD3 311 aaKnown RBP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 NXF3Q9H4D5 531 aaKnown RBP14.08□□□□□ -0.16
HSPG2-213ENST00000498495 SNTG2Q9NY99 539 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 ARHGAP28Q9P2N2 729 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 COG5Q9UP83 839 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 TNFSF13BQ9Y275 285 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 CHD9Q3L8U1 2897 aa14.08□□□□□ -0.16
HSPG2-213ENST00000498495 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-213ENST00000498495 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
HSPG2-213ENST00000498495 ARL5CA6NH57 179 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 TRAK2O60296 914 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 TBCAO75347 108 aaKnown RBP14.07□□□□□ -0.16
HSPG2-213ENST00000498495 DDHD2O94830 711 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 EDN1P05305 212 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 GALTP07902 379 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 MLH1P40692 756 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 STAT6P42226 847 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 ME1P48163 572 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 DCAF4L1Q3SXM0 396 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 EEF1DP3Q658K8 133 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 ZNF280BQ86YH2 543 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 SLC39A11Q8N1S5 342 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 PDILTQ8N807 584 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 ACO2Q99798 780 aaKnown RBP14.07□□□□□ -0.16
HSPG2-213ENST00000498495 TARS2Q9BW92 718 aaKnown RBP14.07□□□□□ -0.16
HSPG2-213ENST00000498495 PARVGQ9HBI0 331 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 TLR9Q9NR96 1032 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 MIOSQ9NXC5 875 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 KLK14Q9P0G3 267 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 LZTS1Q9Y250 596 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 FAN1Q9Y2M0 1017 aa14.07□□□□□ -0.16
HSPG2-213ENST00000498495 NCK2O43639 380 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms