RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CCM2LQ9NUG4 571 aaPredicted RBP6.42□□□□□ -1.38
SSR3-209ENST00000498205 DNAJC28Q9NX36 388 aa6.42□□□□□ -1.38
SSR3-209ENST00000498205 EDARQ9UNE0 448 aa6.42□□□□□ -1.38
SSR3-209ENST00000498205 SPEF1Q9Y4P9 236 aa6.42□□□□□ -1.38
SSR3-209ENST00000498205 CUX2O14529 1486 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 UBE2QL1A1L167 161 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 ACO1P21399 889 aaKnown RBP6.41□□□□□ -1.38
SSR3-209ENST00000498205 MUM1L1Q5H9M0 696 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 METTL24Q5JXM2 366 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 FKBP15Q5T1M5 1219 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 ZNF585AQ6P3V2 769 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
SSR3-209ENST00000498205 COG1Q8WTW3 980 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 ADOQ96SZ5 270 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 PDCD2LQ9BRP1 358 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 QRSL1Q9H0R6 528 aaKnown RBP6.41□□□□□ -1.38
SSR3-209ENST00000498205 GREM2Q9H772 168 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 AGO3Q9H9G7 860 aaKnown RBP6.41□□□□□ -1.38
SSR3-209ENST00000498205 ING3Q9NXR8 418 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 NCDNQ9UBB6 729 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 CLCA2Q9UQC9 943 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 MYRFQ9Y2G1 1151 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 KIF27Q86VH2 1401 aa6.41□□□□□ -1.38
SSR3-209ENST00000498205 PRAMEF4O60810 478 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 CRHR1P34998 444 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 MTNR1BP49286 362 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 UBE3CQ15386 1083 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 TOR2AQ5JU69 321 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 MBNL2Q5VZF2 373 aaKnown RBP6.4□□□□□ -1.38
SSR3-209ENST00000498205 DBX2Q6ZNG2 339 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 SGMS1Q86VZ5 419 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 GLB1L3Q8NCI6 653 aaPredicted RBP6.4□□□□□ -1.38
SSR3-209ENST00000498205 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.4□□□□□ -1.38
SSR3-209ENST00000498205 OR5M3Q8NGP4 307 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 TGFBRAP1Q8WUH2 860 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 WWC2-AS2Q96NR7 200 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 KRTAP3-1Q9BYR8 98 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 HECAQ9UBI9 543 aaPredicted RBP6.4□□□□□ -1.38
SSR3-209ENST00000498205 MRFAP1Q9Y605 127 aa6.4□□□□□ -1.38
SSR3-209ENST00000498205 RAPGEF2Q9Y4G8 1499 aa6.4□□□□□ -1.39
SSR3-209ENST00000498205 CAPN14A8MX76 684 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 GNAT2P19087 354 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 CTSSP25774 331 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 BUD31P41223 144 aaPredicted RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 GZMKP49863 264 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 CDKN1CP49918 316 aaPredicted RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 CDK17Q00537 523 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 ITKQ08881 620 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 MALLQ13021 153 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 ADRM1Q16186 407 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 INAVAQ3KP66 663 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 Q6ZSN1 163 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 CMIPQ8IY22 773 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 GSPT2Q8IYD1 628 aaKnown RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 GPR156Q8NFN8 814 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 TSPEARQ8WU66 669 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 ZNF480Q8WV37 535 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 IL17RAQ96F46 866 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 TMEM176AQ96HP8 235 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 ZNF512Q96ME7 567 aaPredicted RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 CDC5LQ99459 802 aaKnown RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 ENKD1Q9H0I2 346 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 RBM12Q9NTZ6 932 aaKnown RBP6.39□□□□□ -1.39
SSR3-209ENST00000498205 GIT1Q9Y2X7 761 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 GPR45Q9Y5Y3 372 aa6.39□□□□□ -1.39
SSR3-209ENST00000498205 hCG_2014768A0A024R1R8 64 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 SHTN1A0MZ66 631 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 TMEM127O75204 238 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 ACRV1P26436 265 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 HIBADHP31937 336 aaKnown RBP6.38□□□□□ -1.39
SSR3-209ENST00000498205 ANAPC15P60006 121 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 SRSF2Q01130 221 aaKnown RBP6.38□□□□□ -1.39
SSR3-209ENST00000498205 MTMR1Q13613 665 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 ELAVL1Q15717 326 aaKnown RBP6.38□□□□□ -1.39
SSR3-209ENST00000498205 ADI1Q9BV57 179 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 PRDM12Q9H4Q4 367 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 TLR9Q9NR96 1032 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 ZNF277Q9NRM2 450 aaPredicted RBP6.38□□□□□ -1.39
SSR3-209ENST00000498205 TYW1Q9NV66 732 aaKnown RBP6.38□□□□□ -1.39
SSR3-209ENST00000498205 MKS1Q9NXB0 559 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 SCOCQ9UIL1 159 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
SSR3-209ENST00000498205 RRBP1Q9P2E9 1410 aaKnown RBP6.38□□□□□ -1.39
SSR3-209ENST00000498205 CUX1P39880 1505 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 FAM171A2A8MVW0 826 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
SSR3-209ENST00000498205 ENDOD1O94919 500 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 AGXTP21549 392 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 ECHS1P30084 290 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 MRPL49Q13405 166 aaKnown RBP6.37□□□□□ -1.39
SSR3-209ENST00000498205 ACAP1Q15027 740 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 MST1LQ2TV78 715 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 DCAF17Q5H9S7 520 aaPredicted RBP6.37□□□□□ -1.39
SSR3-209ENST00000498205 PGM2L1Q6PCE3 622 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 DOK3Q7L591 496 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 FAM83AQ86UY5 434 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 MSL3Q8N5Y2 521 aaKnown RBP6.37□□□□□ -1.39
SSR3-209ENST00000498205 C1orf162Q8NEQ5 155 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms