RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 MSRAQ9UJ68 235 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 USP18Q9UMW8 372 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 POLR2AP24928 1970 aaKnown RBP5.8□□□□□ -1.48
SMC4-227ENST00000497984 KPNA6O60684 536 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 GAS7O60861 476 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 GPR15P49685 360 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 TAP1Q03518 808 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 DUSP2Q05923 314 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 GDF7Q7Z4P5 450 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 XYLT1Q86Y38 959 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 ARHGEF19Q8IW93 802 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 GAB3Q8WWW8 586 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 FERMT2Q96AC1 680 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 DCLRE1CQ96SD1 692 aaKnown RBP5.8□□□□□ -1.48
SMC4-227ENST00000497984 CYP4F11Q9HBI6 524 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 THG1LQ9NWX6 298 aaKnown RBP5.8□□□□□ -1.48
SMC4-227ENST00000497984 TRPM5Q9NZQ8 1165 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 ANKFY1Q9P2R3 1169 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 TMPRSS11EQ9UL52 423 aa5.8□□□□□ -1.48
SMC4-227ENST00000497984 ST20-MTHFSA0A0A6YYL1 179 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 LCHNA4D1U4 455 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 NCR1O76036 304 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 ZSCAN20P17040 1043 aaPredicted RBP5.79□□□□□ -1.48
SMC4-227ENST00000497984 CLK3P49761 638 aaKnown RBP5.79□□□□□ -1.48
SMC4-227ENST00000497984 CCDC178Q5BJE1 867 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 GPR158Q5T848 1215 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 BTNL9Q6UXG8 535 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 SYT12Q8IV01 421 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 WDR11Q9BZH6 1224 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 MS4A5Q9H3V2 200 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 AKIP1Q9NQ31 210 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 SYBUQ9NX95 663 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 PTGFRNQ9P2B2 879 aa5.79□□□□□ -1.48
SMC4-227ENST00000497984 PRSS38A1L453 326 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 RNASET2O00584 256 aaKnown RBP5.78□□□□□ -1.48
SMC4-227ENST00000497984 PHC1P78364 1004 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 BEAN1Q3B7T3 259 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 ADGRG3Q86Y34 549 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 LYSMD2Q8IV50 215 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 PASD1Q8IV76 773 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 SLC41A1Q8IVJ1 513 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 SYNPOQ8N3V7 929 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 MRFAP1L1Q96HT8 127 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 TEX101Q9BY14 249 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 PRDM13Q9H4Q3 707 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 HDAC5Q9UQL6 1122 aa5.78□□□□□ -1.48
SMC4-227ENST00000497984 GAGE12BA1L429 117 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 GAGE12HA6NDE8 117 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 KIAA0355O15063 1070 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 NRP2O60462 931 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 RNASE9P60153 205 aaKnown RBP5.77□□□□□ -1.49
SMC4-227ENST00000497984 MGAT5Q09328 741 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 UBE3CQ15386 1083 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 CCDC62Q6P9F0 684 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 DRICH1Q6PGQ1 229 aaPredicted RBP5.77□□□□□ -1.49
SMC4-227ENST00000497984 ZNF610Q8N9Z0 462 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 SMC1BQ8NDV3 1235 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 EVLQ9UI08 416 aaPredicted RBP5.77□□□□□ -1.49
SMC4-227ENST00000497984 CD2APQ9Y5K6 639 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 PPP2R3BQ9Y5P8 575 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 NUMBLQ9Y6R0 609 aa5.77□□□□□ -1.49
SMC4-227ENST00000497984 PRR5-ARHGAP8B1AHC4 643 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 NDUFA10O95299 355 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 TYRP1P17643 537 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 XPAP23025 273 aaPredicted RBP5.76□□□□□ -1.49
SMC4-227ENST00000497984 BMPR1AP36894 532 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 NEK4P51957 841 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 KPNA1P52294 538 aaPredicted RBP5.76□□□□□ -1.49
SMC4-227ENST00000497984 C21orf58P58505 322 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 MRPS21P82921 87 aaKnown RBP5.76□□□□□ -1.49
SMC4-227ENST00000497984 APBA1Q02410 837 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 NHLH2Q02577 135 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 COLEC12Q5KU26 742 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 ANKS6Q68DC2 871 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 LMBR1LQ6UX01 489 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 LRRTM3Q86VH5 581 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 LINC00476Q8WZB0 136 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 PRSS50Q9UI38 385 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 CLCA2Q9UQC9 943 aa5.76□□□□□ -1.49
SMC4-227ENST00000497984 EPN1Q9Y6I3 576 aaPredicted RBP5.76□□□□□ -1.49
SMC4-227ENST00000497984 DIRC3C9JPN6 131 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 MASP2O00187 686 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 ZNF185O15231 689 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 LTA4HP09960 611 aaKnown RBP5.75□□□□□ -1.49
SMC4-227ENST00000497984 HSP90B1P14625 803 aaKnown RBP5.75□□□□□ -1.49
SMC4-227ENST00000497984 USP14P54578 494 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 MANFP55145 182 aaKnown RBP5.75□□□□□ -1.49
SMC4-227ENST00000497984 NRG3P56975 720 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 PPARAQ07869 468 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 PCBP1Q15365 356 aaKnown RBP eCLIP5.75□□□□□ -1.497e-12■■■■■ 38.2
SMC4-227ENST00000497984 TERF2Q15554 542 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 STRIP1Q5VSL9 837 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 PLXDC1Q8IUK5 500 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 GLB1L2Q8IW92 636 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 SUPT20HQ8NEM7 779 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 OR10H5Q8NGA6 315 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 ADAM2Q99965 735 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 PRDM12Q9H4Q4 367 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms