RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 MRPL10Q7Z7H8 261 aaKnown RBP12.92□□□□□ -0.34
MRPL55-234ENST00000497758 CDR2LQ86X02 465 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-234ENST00000497758 MYCT1Q8N699 235 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 PPM1EQ8WY54 764 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 MRPL4Q9BYD3 311 aaKnown RBP12.92□□□□□ -0.34
MRPL55-234ENST00000497758 PDZD7Q9H5P4 517 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 RSAD1Q9HA92 442 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 LMCD1Q9NZU5 365 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 ARHGAP28Q9P2N2 729 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 RCOR1Q9UKL0 485 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 MTCH2Q9Y6C9 303 aa12.92□□□□□ -0.34
MRPL55-234ENST00000497758 A0A087X0B3 334 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 LPXNO60711 386 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 LINC00271P0C7V0 271 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 POU3F3P20264 500 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 SCP2P22307 547 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 GIT2Q14161 759 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 AXDND1Q5T1B0 1012 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 AGMOQ6ZNB7 445 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 DYMQ7RTS9 669 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 COLGALT1Q8NBJ5 622 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 SMG8Q8ND04 991 aaKnown RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 LEO1Q8WVC0 666 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 P2RX5Q93086 422 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 DHX58Q96C10 678 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 NTPCRQ9BSD7 190 aaKnown RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 CUEDC2Q9H467 287 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 NXF3Q9H4D5 531 aaKnown RBP12.91□□□□□ -0.34
MRPL55-234ENST00000497758 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 HES2Q9Y543 173 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 A0A0C4DFX4 3053 aa12.91□□□□□ -0.34
MRPL55-234ENST00000497758 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 CARNS1A5YM72 827 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 K7ENM7 598 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 OFD1O75665 1012 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 MAPTP10636 758 aaKnown RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 PPM1AP35813 382 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 MLH1P40692 756 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 ALDH7A1P49419 539 aaKnown RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 ZNF131P52739 623 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 SKIV2LQ15477 1246 aaKnown RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 NT5DC1Q5TFE4 455 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 LRRC55Q6ZSA7 311 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 FAM178BQ8IXR5 827 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 DDX12PQ92771 950 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 BICD1Q96G01 975 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 GBP3Q9H0R5 595 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 CWH43Q9H720 699 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
MRPL55-234ENST00000497758 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 PARP2Q9UGN5 583 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 GIT1Q9Y2X7 761 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 RALGAPA2Q2PPJ7 1873 aa12.9□□□□□ -0.34
MRPL55-234ENST00000497758 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-234ENST00000497758 FNDC1Q4ZHG4 1894 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-234ENST00000497758 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 MYMKA6NI61 221 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 GRM6O15303 877 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
MRPL55-234ENST00000497758 TRAK2O60296 914 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 CSPG5O95196 566 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 POMCP01189 267 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 EDN1P05305 212 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 ITGB1P05556 798 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 IDEP14735 1019 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 GAP43P17677 238 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 AKAP5P24588 427 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 ABCD1P33897 745 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 NCKAP1LP55160 1127 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 AMPD3Q01432 767 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 ZNF568Q3ZCX4 644 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 TIGD5Q53EQ6 642 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 EEF1DP3Q658K8 133 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 KCNT2Q6UVM3 1135 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 HAUS6Q7Z4H7 955 aa12.89□□□□□ -0.35
MRPL55-234ENST00000497758 SLC17A8Q8NDX2 589 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms