RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 KCNB1Q14721 858 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 TMEM132AQ24JP5 1023 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 APBB2Q92870 758 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 FIZ1Q96SL8 496 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 FZD8Q9H461 694 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 RMND1Q9NWS8 449 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 PCDHB13Q9Y5F0 798 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 RHOBTB3O94955 611 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 ZSCAN20P17040 1043 aaPredicted RBP22.01■■□□□ 1.11
CTSD-206ENST00000497544 GTF2BQ00403 316 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 NFKBIBQ15653 356 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 FAM187BQ17R55 369 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 CNKSR3Q6P9H4 555 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 HPS3Q969F9 1004 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 PRIMPOLQ96LW4 560 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 CCDC113Q9H0I3 377 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 ST6GALNAC4Q9H4F1 302 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 SLC39A2Q9NP94 309 aa22.01■■□□□ 1.11
CTSD-206ENST00000497544 ACKR2O00590 384 aa22■■□□□ 1.11
CTSD-206ENST00000497544 FGBP02675 491 aa22■■□□□ 1.11
CTSD-206ENST00000497544 ACTN1P12814 892 aa22■■□□□ 1.11
CTSD-206ENST00000497544 EHHADHQ08426 723 aa22■■□□□ 1.11
CTSD-206ENST00000497544 PRPF4BQ13523 1007 aaKnown RBP22■■□□□ 1.11
CTSD-206ENST00000497544 ALCAMQ13740 583 aa22■■□□□ 1.11
CTSD-206ENST00000497544 IKBKEQ14164 716 aa22■■□□□ 1.11
CTSD-206ENST00000497544 SKOR2Q2VWA4 1001 aaPredicted RBP22■■□□□ 1.11
CTSD-206ENST00000497544 ZC2HC1CQ53FD0 456 aaPredicted RBP22■■□□□ 1.11
CTSD-206ENST00000497544 PPP4R3CPQ6ZMV5 832 aa22■■□□□ 1.11
CTSD-206ENST00000497544 FAM43BQ6ZT52 329 aaPredicted RBP22■■□□□ 1.11
CTSD-206ENST00000497544 MICALL1Q8N3F8 863 aa22■■□□□ 1.11
CTSD-206ENST00000497544 SPATA20Q8TB22 786 aa22■■□□□ 1.11
CTSD-206ENST00000497544 FTHL17Q9BXU8 183 aa22■■□□□ 1.11
CTSD-206ENST00000497544 KIAA1468Q9P260 1216 aa22■■□□□ 1.11
CTSD-206ENST00000497544 TBX20Q9UMR3 447 aa22■■□□□ 1.11
CTSD-206ENST00000497544 TRANK1O15050 2925 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 MYBP10242 640 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 AXLP30530 894 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 SARSP49591 514 aaKnown RBP21.99■■□□□ 1.11
CTSD-206ENST00000497544 RASIP1Q5U651 963 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 KCNN1Q92952 543 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 SYAP1Q96A49 352 aaPredicted RBP21.99■■□□□ 1.11
CTSD-206ENST00000497544 HVCN1Q96D96 273 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 CHST12Q9NRB3 414 aa21.99■■□□□ 1.11
CTSD-206ENST00000497544 PIN4Q9Y237 131 aaKnown RBP21.99■■□□□ 1.11
CTSD-206ENST00000497544 TSPAN1O60635 241 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 PRPF6O94906 941 aaKnown RBP21.98■■□□□ 1.11
CTSD-206ENST00000497544 STK4Q13043 487 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 AMHR2Q16671 573 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 ZNF365Q70YC5 407 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 TAS1R3Q7RTX0 852 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 VWCEQ96DN2 955 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 BICD1Q96G01 975 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 ACCSQ96QU6 501 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 MRPL4Q9BYD3 311 aaKnown RBP21.98■■□□□ 1.11
CTSD-206ENST00000497544 GTPBP4Q9BZE4 634 aaKnown RBP21.98■■□□□ 1.11
CTSD-206ENST00000497544 AGPAT5Q9NUQ2 364 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 EXOC7Q9UPT5 735 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 WDFY4Q6ZS81 3184 aa21.98■■□□□ 1.11
CTSD-206ENST00000497544 RBAK-RBAKDNI3L0D1 243 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 EIF3DO15371 548 aaKnown RBP eCLIP21.97■■□□□ 1.11
CTSD-206ENST00000497544 B4GALT5O43286 388 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 ARF4P18085 180 aaPredicted RBP21.97■■□□□ 1.11
CTSD-206ENST00000497544 CASP5P51878 434 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 NHLH1Q02575 133 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 KLHL40Q2TBA0 621 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 TMEM240Q5SV17 173 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 CCDC183Q5T5S1 534 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 L1TD1Q5T7N2 865 aaKnown RBP21.97■■□□□ 1.11
CTSD-206ENST00000497544 NT5DC1Q5TFE4 455 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 ISM2Q6H9L7 571 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 PSRC1Q6PGN9 363 aaPredicted RBP21.97■■□□□ 1.11
CTSD-206ENST00000497544 C16orf59Q7L2K0 433 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 SYCP3Q8IZU3 236 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 CPB2Q96IY4 423 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 ADAM2Q99965 735 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 STRA6Q9BX79 667 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 FGFBP2Q9BYJ0 223 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 NKX2-4Q9H2Z4 354 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 TMX1Q9H3N1 280 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 MAN1B1Q9UKM7 699 aa21.97■■□□□ 1.11
CTSD-206ENST00000497544 ABHD14A-ACY1A0A1B0GW23 586 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 TLL1O43897 1013 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 EFCAB14O75071 495 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 PPP1R37O75864 691 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 KIF20AO95235 890 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 HOXA11P31270 313 aaPredicted RBP21.96■■□□□ 1.11
CTSD-206ENST00000497544 ZNF658Q5TYW1 1059 aaPredicted RBP21.96■■□□□ 1.11
CTSD-206ENST00000497544 TWF2Q6IBS0 349 aaKnown RBP21.96■■□□□ 1.11
CTSD-206ENST00000497544 CAVIN1Q6NZI2 390 aaKnown RBP21.96■■□□□ 1.11
CTSD-206ENST00000497544 NOTUMQ6P988 496 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 OTOP2Q7RTS6 562 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 ZNF507Q8TCN5 953 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 TARS2Q9BW92 718 aaKnown RBP21.96■■□□□ 1.11
CTSD-206ENST00000497544 TMEM206Q9H813 350 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 USP20Q9Y2K6 914 aa21.96■■□□□ 1.11
CTSD-206ENST00000497544 PRRC2BQ5JSZ5 2229 aaKnown RBP21.96■■□□□ 1.11
CTSD-206ENST00000497544 A0A1B0GUA9 196 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 BIN1O00499 593 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 ENPP3O14638 875 aa21.95■■□□□ 1.1
CTSD-206ENST00000497544 N4BP3O15049 544 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms