RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-212ENST00000496458 MUM1Q2TAK8 710 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 CRIP3Q6Q6R5 217 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 KCNK18Q7Z418 384 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 MDGA1Q8NFP4 955 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 ST8SIA2Q92186 375 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 PGBD4Q96DM1 585 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 GPR87Q9BY21 358 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 ZNF341Q9BYN7 854 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 KRTAP4-11Q9BYQ6 195 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 CSRNP2Q9H175 543 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 IFT122Q9HBG6 1241 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 AURKAIP1Q9NWT8 199 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-212ENST00000496458 DNAJC28Q9NX36 388 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 WASHC2AQ641Q2 1341 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 GZMKP49863 264 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 RABGGTBP53611 331 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 DGCR2P98153 550 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 MRPL49Q13405 166 aaKnown RBP7.79□□□□□ -1.16
SF3B1-212ENST00000496458 C19orf54Q5BKX5 351 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 APBB1IPQ7Z5R6 666 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-212ENST00000496458 TMPRSS6Q8IU80 811 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 ZNF503Q96F45 646 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 PAWRQ96IZ0 340 aaKnown RBP7.79□□□□□ -1.16
SF3B1-212ENST00000496458 PLEKHG4BQ96PX9 1271 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 CPPED1Q9BRF8 314 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-212ENST00000496458 SLC5A4Q9NY91 659 aa7.79□□□□□ -1.16
SF3B1-212ENST00000496458 ITGA10O75578 1167 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 OSMP13725 252 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 HK1P19367 917 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 PTH1RQ03431 593 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 ADRM1Q16186 407 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 MIIPQ5JXC2 388 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 BTNL9Q6UXG8 535 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 Q8N1X5 172 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 LILRA3Q8N6C8 439 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-212ENST00000496458 CNTD1Q8N815 330 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 ZNF480Q8WV37 535 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 CDC5LQ99459 802 aaKnown RBP7.78□□□□□ -1.16
SF3B1-212ENST00000496458 ACE2Q9BYF1 805 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-212ENST00000496458 GPRC5DQ9NZD1 345 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 RPTORQ8N122 1335 aa7.78□□□□□ -1.16
SF3B1-212ENST00000496458 KLRG2A4D1S0 409 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-212ENST00000496458 K7ESF4 209 aa7.77□□□□□ -1.17
SF3B1-212ENST00000496458 C1QL3Q5VWW1 255 aa7.77□□□□□ -1.17
SF3B1-212ENST00000496458 NECAB2Q7Z6G3 386 aa7.77□□□□□ -1.17
SF3B1-212ENST00000496458 RIN2Q8WYP3 895 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-212ENST00000496458 MNTQ99583 582 aa7.77□□□□□ -1.17
SF3B1-212ENST00000496458 TRIM8Q9BZR9 551 aa7.77□□□□□ -1.17
SF3B1-212ENST00000496458 CEP72Q9P209 647 aa7.77□□□□□ -1.17
SF3B1-212ENST00000496458 ZMYM3Q14202 1370 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 GOLGA6L6A8MZA4 724 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 AKR1B10O60218 316 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 ADSLP30566 484 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-212ENST00000496458 AMPD3Q01432 767 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 APBA1Q02410 837 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 KLF1Q13351 362 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-212ENST00000496458 MST1LQ2TV78 715 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 XYLT1Q86Y38 959 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 MDM1Q8TC05 714 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 CACTINQ8WUQ7 758 aaKnown RBP7.76□□□□□ -1.17
SF3B1-212ENST00000496458 FATE1Q969F0 183 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 KRTAP4-2Q9BYR5 136 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 PUS7LQ9H0K6 701 aaKnown RBP7.76□□□□□ -1.17
SF3B1-212ENST00000496458 TMPRSS5Q9H3S3 457 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 DMRT3Q9NQL9 472 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 HDAC5Q9UQL6 1122 aa7.76□□□□□ -1.17
SF3B1-212ENST00000496458 NPIPB8E9PQR5 432 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 ADCY6O43306 1168 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 PHF2O75151 1096 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 FSHBP01225 129 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 CDK11BP21127 795 aaKnown RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 CDKN1CP49918 316 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 SLC5A3P53794 718 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 LSM12Q3MHD2 195 aaKnown RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 DCAF17Q5H9S7 520 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 GPR156Q8NFN8 814 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 LSM14BQ9BX40 385 aaKnown RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 CPEB1Q9BZB8 566 aaKnown RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 ZNF703Q9H7S9 590 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-212ENST00000496458 PARPBPQ9NWS1 579 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 ZBTB21Q9ULJ3 1066 aa7.75□□□□□ -1.17
SF3B1-212ENST00000496458 GASTP01350 101 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 MTNR1BP49286 362 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 ANO4Q32M45 955 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 MUM1L1Q5H9M0 696 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 PRAMEF14Q5SWL7 426 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 MBNL2Q5VZF2 373 aaKnown RBP7.74□□□□□ -1.17
SF3B1-212ENST00000496458 HTR3DQ70Z44 454 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 AMOTL1Q8IY63 956 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 PDCD2LQ9BRP1 358 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 GREM2Q9H772 168 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 TRPS1Q9UHF7 1281 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 SCOCQ9UIL1 159 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 XDHP47989 1333 aa7.74□□□□□ -1.17
SF3B1-212ENST00000496458 FZD7O75084 574 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
SF3B1-212ENST00000496458 CRHR1P34998 444 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 IARSP41252 1262 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms