RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 HNRNPDLO14979 420 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 ITGB8P26012 769 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 RPL13P26373 211 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 PBX2P40425 430 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 STX17P56962 302 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 PTENP60484 403 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 HIC1Q14526 733 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 SPATA1Q5VX52 437 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 CENPPQ6IPU0 288 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 SRGAP1Q7Z6B7 1085 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 NOC3LQ8WTT2 800 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 STRA6Q9BX79 667 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 MRPL4Q9BYD3 311 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 TRMT13Q9NUP7 481 aaKnown RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 PRMT7Q9NVM4 692 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-210ENST00000496049 XIRP2A4UGR9 3374 aa16.43■□□□□ 0.22
GAPDH-210ENST00000496049 TRIP12Q14669 1992 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-210ENST00000496049 CHD7Q9P2D1 2997 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 A0A087WZ62 844 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 ERLIN2O94905 339 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 PRKCBP05771 671 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 SFPQP23246 707 aaKnown RBP eCLIP16.42■□□□□ 0.22
GAPDH-210ENST00000496049 LIG4P49917 911 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
GAPDH-210ENST00000496049 TMEM62Q0P6H9 643 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 GSE1Q14687 1217 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 KIZQ2M2Z5 673 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 EDRF1Q3B7T1 1238 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 RPAINQ86UA6 219 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 FAM114A1Q8IWE2 563 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 CSGALNACT2Q8N6G5 542 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
GAPDH-210ENST00000496049 PRIMPOLQ96LW4 560 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 FDXACB1Q9BRP7 624 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-210ENST00000496049 TSPYL2Q9H2G4 693 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-210ENST00000496049 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 GINS2Q9Y248 185 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 TRPV2Q9Y5S1 764 aa16.42■□□□□ 0.22
GAPDH-210ENST00000496049 ZMYM2Q9UBW7 1377 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 B4GALT4O60513 344 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 GPR37L1O60883 481 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 THPOP40225 353 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 CRYBB1P53674 252 aaPredicted RBP16.41■□□□□ 0.22
GAPDH-210ENST00000496049 MBTD1Q05BQ5 628 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 TTI2Q6NXR4 508 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
GAPDH-210ENST00000496049 LUZP1Q86V48 1076 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 GAS2L3Q86XJ1 694 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 DHX40Q8IX18 779 aaKnown RBP16.41■□□□□ 0.22
GAPDH-210ENST00000496049 ANKRD20A12PQ8NF67 263 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 CCDC113Q9H0I3 377 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
GAPDH-210ENST00000496049 TRAF3IP3Q9Y228 551 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 NFE2L3Q9Y4A8 694 aa16.41■□□□□ 0.22
GAPDH-210ENST00000496049 PRRC2BQ5JSZ5 2229 aaKnown RBP16.4■□□□□ 0.22
GAPDH-210ENST00000496049 TRIM49BA6NDI0 452 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 GRXCR1A8MXD5 290 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 DCDC2CA8MYV0 355 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 PQBP1O60828 265 aaKnown RBP16.4■□□□□ 0.22
GAPDH-210ENST00000496049 GPR32O75388 356 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 FKBP3Q00688 224 aaKnown RBP16.4■□□□□ 0.22
GAPDH-210ENST00000496049 BFSP2Q13515 415 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 PRPF4BQ13523 1007 aaKnown RBP16.4■□□□□ 0.22
GAPDH-210ENST00000496049 IQCB1Q15051 598 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 NFIL3Q16649 462 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 ANKRD40Q6AI12 368 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 ARMCX5Q6P1M9 558 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 ZPBP2Q6X784 338 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 FAM126BQ8IXS8 530 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 ZNF668Q96K58 619 aaPredicted RBP16.4■□□□□ 0.22
GAPDH-210ENST00000496049 CEP63Q96MT8 703 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 OSMRQ99650 979 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 PBX4Q9BYU1 374 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 CELF4Q9BZC1 486 aaKnown RBP16.4■□□□□ 0.22
GAPDH-210ENST00000496049 TRPV6Q9H1D0 765 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 RBSNQ9H1K0 784 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 ADAMTS10Q9H324 1103 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 IFT122Q9HBG6 1241 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 AGPAT3Q9NRZ7 376 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 CNTNAP2Q9UHC6 1331 aa16.4■□□□□ 0.22
GAPDH-210ENST00000496049 ACKR2O00590 384 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 KIAA0391O15091 583 aaKnown RBP16.39■□□□□ 0.21
GAPDH-210ENST00000496049 CETN3O15182 167 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 GNA14O95837 355 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 PIGRP01833 764 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 NR3C1P04150 777 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 CTSHP09668 335 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 DARSP14868 501 aaKnown RBP16.39■□□□□ 0.21
GAPDH-210ENST00000496049 EIF4BP23588 611 aaKnown RBP16.39■□□□□ 0.21
GAPDH-210ENST00000496049 NR2F2P24468 414 aa16.39■□□□□ 0.21
GAPDH-210ENST00000496049 MATR3P43243 847 aaKnown RBP eCLIP16.39■□□□□ 0.21
GAPDH-210ENST00000496049 CDK7P50613 346 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms