RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 PCBP1Q15365 356 aaKnown RBP eCLIP19.61■□□□□ 0.73
TMEM53-209ENST00000495630 OTUD6AQ7L8S5 288 aa19.61■□□□□ 0.73
TMEM53-209ENST00000495630 SKAP1Q86WV1 359 aa19.61■□□□□ 0.73
TMEM53-209ENST00000495630 RNF168Q8IYW5 571 aaPredicted RBP19.61■□□□□ 0.73
TMEM53-209ENST00000495630 SLKQ9H2G2 1235 aaPredicted RBP19.61■□□□□ 0.73
TMEM53-209ENST00000495630 NARSO43776 548 aaKnown RBP19.6■□□□□ 0.73
TMEM53-209ENST00000495630 NR1I2O75469 434 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 AXLP30530 894 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 OR1G1P47890 313 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 NCBP1Q09161 790 aaKnown RBP19.6■□□□□ 0.73
TMEM53-209ENST00000495630 NPY5RQ15761 445 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-209ENST00000495630 KRT25Q7Z3Z0 450 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 C4orf19Q8IY42 314 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 SMG8Q8ND04 991 aaKnown RBP19.6■□□□□ 0.73
TMEM53-209ENST00000495630 RSAD2Q8WXG1 361 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 PLEKHA4Q9H4M7 779 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 MARCH5Q9NX47 278 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 VAV3Q9UKW4 847 aa19.6■□□□□ 0.73
TMEM53-209ENST00000495630 PRG3Q9Y2Y8 225 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-209ENST00000495630 KRBA1A5PL33 1030 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 ARL5CA6NH57 179 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 CPLX1O14810 134 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 CFHP08603 1231 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 GLUD2P49448 558 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 DSG1Q02413 1049 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 DSC1Q08554 894 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 EPHA7Q15375 998 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 INF2Q27J81 1249 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 PPP4R3AQ6IN85 833 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 FERMT3Q86UX7 667 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 GPR65Q8IYL9 337 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 RNF149Q8NC42 400 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 CCDC51Q96ER9 411 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 ZNF274Q96GC6 653 aaPredicted RBP19.59■□□□□ 0.73
TMEM53-209ENST00000495630 COLEC11Q9BWP8 271 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 CHST7Q9NS84 486 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.59■□□□□ 0.73
TMEM53-209ENST00000495630 IPPQ9Y573 584 aa19.59■□□□□ 0.73
TMEM53-209ENST00000495630 CLUHO75153 1309 aa19.58■□□□□ 0.73
TMEM53-209ENST00000495630 TBX3O15119 743 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 SLC37A4O43826 429 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 ERLIN2O94905 339 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 SRFP11831 508 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 GCFC2P16383 781 aaKnown RBP19.58■□□□□ 0.72
TMEM53-209ENST00000495630 MXD4Q14582 209 aaPredicted RBP19.58■□□□□ 0.72
TMEM53-209ENST00000495630 CPLX2Q6PUV4 134 aaKnown RBP19.58■□□□□ 0.72
TMEM53-209ENST00000495630 RUFY3Q7L099 469 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 SMG7Q92540 1137 aaKnown RBP19.58■□□□□ 0.72
TMEM53-209ENST00000495630 MYADMQ96S97 322 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 GAD1Q99259 594 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 NT5C3AQ9H0P0 336 aa19.58■□□□□ 0.72
TMEM53-209ENST00000495630 WRAP73Q9P2S5 460 aaPredicted RBP19.58■□□□□ 0.72
TMEM53-209ENST00000495630 RFPL2O75678 378 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 LMNAP02545 664 aaKnown RBP19.57■□□□□ 0.72
TMEM53-209ENST00000495630 YWHABP31946 246 aaKnown RBP19.57■□□□□ 0.72
TMEM53-209ENST00000495630 PTENP60484 403 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 POU5F1BQ06416 359 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 TOB2Q14106 344 aaPredicted RBP19.57■□□□□ 0.72
TMEM53-209ENST00000495630 PHLDB3Q6NSJ2 640 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 NOTUMQ6P988 496 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 KCNG4Q8TDN1 519 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 ZNF707Q96C28 371 aaPredicted RBP19.57■□□□□ 0.72
TMEM53-209ENST00000495630 RNF39Q9H2S5 420 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 ZSWIM6Q9HCJ5 1215 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.57■□□□□ 0.72
TMEM53-209ENST00000495630 MIOSQ9NXC5 875 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 ZDHHC7Q9NXF8 308 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 GIT1Q9Y2X7 761 aa19.57■□□□□ 0.72
TMEM53-209ENST00000495630 GVINP1Q7Z2Y8 2422 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 DMDP11532 3685 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 DENND4AQ7Z401 1863 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 LAMP2P13473 410 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 RFX1P22670 979 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 EMC2Q15006 297 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 XKR9Q5GH70 373 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 LILRA6Q6PI73 481 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 NEK8Q86SG6 692 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 NAP1L4Q99733 375 aaKnown RBP19.56■□□□□ 0.72
TMEM53-209ENST00000495630 EIF2AQ9BY44 585 aaKnown RBP19.56■□□□□ 0.72
TMEM53-209ENST00000495630 CSRNP2Q9H175 543 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 ZSWIM4Q9H7M6 989 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 PIDD1Q9HB75 910 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 FNIP2Q9P278 1114 aa19.56■□□□□ 0.72
TMEM53-209ENST00000495630 CCDC194A0A1B0GVG4 234 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 ANHXE9PGG2 379 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 MARCH6O60337 910 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 TSPAN1O60635 241 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 REC8O95072 547 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 SPATA31D3P0C874 917 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 MYBP10242 640 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 MLH1P40692 756 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 USP41Q3LFD5 358 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 SPATA31D4Q6ZUB0 917 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 PALB2Q86YC2 1186 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 IFNLR1Q8IU57 520 aaPredicted RBP19.55■□□□□ 0.72
TMEM53-209ENST00000495630 HACE1Q8IYU2 909 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 HAS1Q92839 578 aa19.55■□□□□ 0.72
TMEM53-209ENST00000495630 AIFM3Q96NN9 605 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms