RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 KCNK18Q7Z418 384 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 SLC39A11Q8N1S5 342 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 ADAMTS19Q8TE59 1207 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 TCF25Q9BQ70 676 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 APOL6Q9BWW8 343 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 IGFLR1Q9H665 355 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 KMT5AQ9NQR1 393 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 FAM50BQ9Y247 325 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
HDAC4-211ENST00000494800 IRS1P35568 1242 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 NPTX2P47972 431 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 KCNQ1P51787 676 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 SMTNP53814 917 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
HDAC4-211ENST00000494800 HYAL1Q12794 435 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 LEXMQ3ZCV2 418 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 TMC7Q7Z402 723 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 CDCA3Q99618 268 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-211ENST00000494800 TMEM175Q9BSA9 504 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 KIFC3Q9BVG8 833 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 CCDC113Q9H0I3 377 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 NXF3Q9H4D5 531 aaKnown RBP19.44■□□□□ 0.7
HDAC4-211ENST00000494800 NRDE2Q9H7Z3 1164 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 TLE6Q9H808 572 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 POLD4Q9HCU8 107 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 CCDC39Q9UFE4 941 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 HES2Q9Y543 173 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 ZMYM2Q9UBW7 1377 aa19.44■□□□□ 0.7
HDAC4-211ENST00000494800 ARL5CA6NH57 179 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 POMCP01189 267 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 ALDH2P05091 517 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 SRGAP2BP0DMP2 458 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 BMP1P13497 986 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 MARCKSP29966 332 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-211ENST00000494800 MLH1P40692 756 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 NRIP1P48552 1158 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 SLC12A3P55017 1021 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 COL19A1Q14993 1142 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 DCAF4L1Q3SXM0 396 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 CDR2LQ86X02 465 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-211ENST00000494800 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-211ENST00000494800 RPS6KC1Q96S38 1066 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 UHRF1Q96T88 793 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-211ENST00000494800 GAD1Q99259 594 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 PDZD7Q9H5P4 517 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 TMEM134Q9H6X4 195 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 LARSQ9P2J5 1176 aaKnown RBP19.43■□□□□ 0.7
HDAC4-211ENST00000494800 PARP2Q9UGN5 583 aa19.43■□□□□ 0.7
HDAC4-211ENST00000494800 SRPRBQ9Y5M8 271 aaKnown RBP19.43■□□□□ 0.7
HDAC4-211ENST00000494800 REV3LO60673 3130 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 NT5C1B-RDH14C9J2C7 533 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 H0YCG3 227 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
HDAC4-211ENST00000494800 GALTP07902 379 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 PLS3P13797 630 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 CA8P35219 290 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 NDUFV1P49821 464 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 ERVFC1P60507 584 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 RAD51AP2Q09MP3 1159 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 STRN3Q13033 797 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 SMC1AQ14683 1233 aaKnown RBP19.42■□□□□ 0.7
HDAC4-211ENST00000494800 KARSQ15046 597 aaKnown RBP19.42■□□□□ 0.7
HDAC4-211ENST00000494800 PTPAQ15257 358 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 ATF7IP2Q5U623 682 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 PLPP4Q5VZY2 271 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 FAM173BQ6P4H8 233 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 RBM23Q86U06 439 aaKnown RBP19.42■□□□□ 0.7
HDAC4-211ENST00000494800 EFHBQ8N7U6 833 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 TMEM87AQ8NBN3 555 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 IGSF21Q96ID5 467 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 CCSER1Q9C0I3 900 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 ODF2LQ9ULJ1 636 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 FAN1Q9Y2M0 1017 aa19.42■□□□□ 0.7
HDAC4-211ENST00000494800 XIRP2A4UGR9 3374 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 H3BQ06 376 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-211ENST00000494800 FSCN2O14926 492 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 INPPL1O15357 1258 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 PLCG1P19174 1290 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 AKAP5P24588 427 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 GRIN1Q05586 938 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 GIT2Q14161 759 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 STK38Q15208 465 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 CTC1Q2NKJ3 1217 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 ADGRD2Q7Z7M1 963 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 GPBP1Q86WP2 473 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 ZNF280BQ86YH2 543 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 DAW1Q8N136 415 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 SPIRE2Q8WWL2 714 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 MRPL4Q9BYD3 311 aaKnown RBP19.41■□□□□ 0.7
HDAC4-211ENST00000494800 ARHGAP28Q9P2N2 729 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 DNAJB4Q9UDY4 337 aa19.41■□□□□ 0.7
HDAC4-211ENST00000494800 FBXO2Q9UK22 296 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-211ENST00000494800 MORC2Q9Y6X9 1032 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-211ENST00000494800 DDHD2O94830 711 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 SCP2P22307 547 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 SLC11A1P49279 550 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 SCNN1GP51170 649 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 MAPK7Q13164 816 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 ADAM15Q13444 863 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms