RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLC27A1Q6PCB7 646 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 EP400NLQ6ZTU2 488 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 HACE1Q8IYU2 909 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 MICAL1Q8TDZ2 1067 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 BSNDQ8WZ55 320 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 TMEM169Q96HH4 297 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 TCF25Q9BQ70 676 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 EIF2AQ9BY44 585 aaKnown RBP14.58□□□□□ -0.08
ERCC3-209ENST00000494464 CCDC113Q9H0I3 377 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 FZD8Q9H461 694 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 NRDE2Q9H7Z3 1164 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 ENTPD7Q9NQZ7 604 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 DNM3Q9UQ16 869 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 NCOR1O75376 2440 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 B4GALT5O43286 388 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 GLP2RO95838 553 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 BMP15O95972 392 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 ITGA4P13612 1032 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 IL9P15248 144 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 DEKP35659 375 aaKnown RBP14.57□□□□□ -0.08
ERCC3-209ENST00000494464 NDUFV1P49821 464 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 RNASELQ05823 741 aaKnown RBP14.57□□□□□ -0.08
ERCC3-209ENST00000494464 DUSP6Q16828 381 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 PLPP4Q5VZY2 271 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 MSLNLQ96KJ4 702 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 AK8Q96MA6 479 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 TMEM175Q9BSA9 504 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 TRIM6Q9C030 488 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-209ENST00000494464 IGFLR1Q9H665 355 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 TLE6Q9H808 572 aa14.57□□□□□ -0.08
ERCC3-209ENST00000494464 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 VWA3AA6NCI4 1184 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 E9PMD0 336 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 SLC26A4O43511 780 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 B4GALT3O60512 393 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 GALTP07902 379 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 CDC25AP30304 524 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 SMAD4Q13485 552 aaKnown RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 SMC1AQ14683 1233 aaKnown RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 MAPK6Q16659 721 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 FOXD4L5Q5VV16 416 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 TMEM173Q86WV6 379 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 FAM178BQ8IXR5 827 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 DEPTORQ8TB45 409 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 FOXD4L4Q8WXT5 416 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 IGSF21Q96ID5 467 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 IFT74Q96LB3 600 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 NT5C3AQ9H0P0 336 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 NXF3Q9H4D5 531 aaKnown RBP14.56□□□□□ -0.08
ERCC3-209ENST00000494464 DNAJB4Q9UDY4 337 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 STK39Q9UEW8 545 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 PRKAG3Q9UGI9 489 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
ERCC3-209ENST00000494464 ARL5CA6NH57 179 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 NT5C1B-RDH14C9J2C7 533 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 ACKR2O00590 384 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 N4BP3O15049 544 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 MBTPS2O43462 519 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 MBD3O95983 291 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 PRKCBP05771 671 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 MLH1P40692 756 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 SLC11A1P49279 550 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 AFF1P51825 1210 aaKnown RBP14.55□□□□□ -0.08
ERCC3-209ENST00000494464 EFNA5P52803 228 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 COASYQ13057 564 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 KCNC3Q14003 757 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 SMAD2Q15796 467 aaKnown RBP14.55□□□□□ -0.08
ERCC3-209ENST00000494464 TMEM184AQ6ZMB5 413 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 TMC7Q7Z402 723 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 KCNK18Q7Z418 384 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 DDX53Q86TM3 631 aaKnown RBP14.55□□□□□ -0.08
ERCC3-209ENST00000494464 RBM23Q86U06 439 aaKnown RBP14.55□□□□□ -0.08
ERCC3-209ENST00000494464 ZNF280BQ86YH2 543 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 SMRP1Q8NCR6 262 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 TIPINQ9BVW5 301 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 ZBP1Q9H171 429 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 CLEC1BQ9P126 229 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 CD207Q9UJ71 328 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 HES2Q9Y543 173 aa14.55□□□□□ -0.08
ERCC3-209ENST00000494464 PHLPP2Q6ZVD8 1323 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 HIDE1A8MVS5 230 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 DDHD2O94830 711 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 NPTXRO95502 500 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 POMCP01189 267 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 SRGAP2BP0DMP2 458 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 GUCY2CP25092 1073 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 DSC1Q08554 894 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 PRPF4BQ13523 1007 aaKnown RBP14.54□□□□□ -0.08
ERCC3-209ENST00000494464 BMS1Q14692 1282 aaKnown RBP14.54□□□□□ -0.08
ERCC3-209ENST00000494464 TMEM119Q4V9L6 283 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 DAW1Q8N136 415 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 VN1R2Q8NFZ6 395 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 BCL7CQ8WUZ0 217 aaPredicted RBP14.54□□□□□ -0.08
ERCC3-209ENST00000494464 DRC1Q96MC2 740 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 PNMA5Q96PV4 448 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 FAM193BQ96PV7 902 aaPredicted RBP14.54□□□□□ -0.08
ERCC3-209ENST00000494464 GAD1Q99259 594 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 RUSC1Q9BVN2 902 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 GBP3Q9H0R5 595 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms