RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 DYDC2Q96IM9 177 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 TMEM117Q9H0C3 514 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 MED4Q9NPJ6 270 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 SUCLA2Q9P2R7 463 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 CD207Q9UJ71 328 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 CEP131Q9UPN4 1083 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 JRKLQ9Y4A0 524 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 CACNA1HO95180 2353 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 CCDC194A0A1B0GVG4 234 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 CCNT1O60563 726 aaKnown RBP9.04□□□□□ -0.96
HDAC6-234ENST00000493923 GPR37L1O60883 481 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 CCDC192P0DO97 292 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 NDUFV1P49821 464 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 PSMC5P62195 406 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 SMAD4Q13485 552 aaKnown RBP9.04□□□□□ -0.96
HDAC6-234ENST00000493923 CUL4AQ13619 759 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 KCNC3Q14003 757 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 CTTNQ14247 550 aaKnown RBP9.04□□□□□ -0.96
HDAC6-234ENST00000493923 ZRSR1Q15695 479 aaKnown RBP9.04□□□□□ -0.96
HDAC6-234ENST00000493923 TPD52L1Q16890 204 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-234ENST00000493923 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 TMEM31Q5JXX7 168 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 PPP4R3AQ6IN85 833 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 GALNT17Q6IS24 598 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 KCNT2Q6UVM3 1135 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 NEK8Q86SG6 692 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 RHPN2Q8IUC4 686 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 ADHFE1Q8IWW8 467 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 THNSL1Q8IYQ7 743 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 CNPY4Q8N129 248 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 FBXO18Q8NFZ0 1043 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 AUTS2Q8WXX7 1259 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 GTF3C6Q969F1 213 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 TMEM143Q96AN5 459 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 SCLT1Q96NL6 688 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 APOL5Q9BWW9 433 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 VN1R3Q9BXE9 311 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 C1QTNF1Q9BXJ1 281 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 TMEM60Q9H2L4 133 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 ELAC1Q9H777 363 aaKnown RBP9.04□□□□□ -0.96
HDAC6-234ENST00000493923 IFT122Q9HBG6 1241 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 XPNPEP1Q9NQW7 623 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 CYP26B1Q9NR63 512 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 PYCARDQ9ULZ3 195 aa9.04□□□□□ -0.96
HDAC6-234ENST00000493923 A0A0U1RQF3 1178 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 CCP110O43303 1012 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 EYA4O95677 639 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 H2AFXP16104 143 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 TMOD1P28289 359 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 HOXA11P31270 313 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 PHKA2P46019 1235 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 QARSP47897 775 aaKnown RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 ANAPC15P60006 121 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 GUCY1B3Q02153 619 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 CYP4A11Q02928 519 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 ZSCAN26Q16670 478 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 DUSP6Q16828 381 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 UBXN11Q5T124 520 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 NCAPH2Q6IBW4 605 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 LLGL2Q6P1M3 1020 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 SYCE2Q6PIF2 218 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 LEKR1Q6ZMV7 388 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 SRLQ86TD4 932 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 SLC39A11Q8N1S5 342 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 SMRP1Q8NCR6 262 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 PRPF31Q8WWY3 499 aaKnown RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 MRPS27Q92552 414 aaKnown RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 EXOC4Q96A65 974 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 NLRP4Q96MN2 994 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 LXNQ9BS40 222 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 GCOM2Q9BZD3 368 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 KCNF1Q9H3M0 494 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 DHX33Q9H6R0 707 aaKnown RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 TLE6Q9H808 572 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 TLR9Q9NR96 1032 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 MUTYHQ9UIF7 546 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 ZDHHC9Q9Y397 364 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-234ENST00000493923 PCDHB12Q9Y5F1 795 aa9.03□□□□□ -0.96
HDAC6-234ENST00000493923 NCK2O43639 380 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 NRDCO43847 1150 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 CDKL5O76039 1030 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 SLITRK3O94933 977 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 SRGAP2CP0DJJ0 459 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 LAG3P18627 525 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 NEK4P51957 841 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 BCAR1P56945 870 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 PLCB3Q01970 1234 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 LAMTOR4Q0VGL1 99 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 COASYQ13057 564 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 EPHA7Q15375 998 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 PTPN14Q15678 1187 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 PUS10Q3MIT2 529 aaKnown RBP9.02□□□□□ -0.97
HDAC6-234ENST00000493923 ODR4Q5SWX8 454 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms