RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 LAMC1P11047 1609 aa17.31■□□□□ 0.36
BRAT1-206ENST00000493232 E5RI56 91 aa17.31■□□□□ 0.36
BRAT1-206ENST00000493232 ADORA2BP29275 332 aa17.31■□□□□ 0.36
BRAT1-206ENST00000493232 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
BRAT1-206ENST00000493232 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
BRAT1-206ENST00000493232 EMSYQ7Z589 1322 aa17.31■□□□□ 0.36
BRAT1-206ENST00000493232 RPSAP08865 295 aaKnown RBP17.3■□□□□ 0.36
BRAT1-206ENST00000493232 MORF4L2Q15014 288 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
BRAT1-206ENST00000493232 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 GYG2O15488 501 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 KRT14P02533 472 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 NFIXQ14938 502 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 STILQ15468 1287 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 BTBD8Q5XKL5 378 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 PDXDC1Q6P996 788 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 PPM1NQ8N819 430 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 LPAR1Q92633 364 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 ASIC4Q96FT7 647 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 TEX12Q9BXU0 123 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 MAP3K20Q9NYL2 800 aaKnown RBP17.3■□□□□ 0.36
BRAT1-206ENST00000493232 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.3■□□□□ 0.36
BRAT1-206ENST00000493232 MXD4Q14582 209 aaPredicted RBP17.3■□□□□ 0.36
BRAT1-206ENST00000493232 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 ANP32DO95626 131 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 SLC1A1P43005 524 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 CDK17Q00537 523 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 GPS1Q13098 491 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
BRAT1-206ENST00000493232 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
BRAT1-206ENST00000493232 PPP1R12AO14974 1030 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 SRGAP2O75044 1071 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 TADA3O75528 432 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 PRAMEP78395 509 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 MYCBPQ99417 103 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 TRIM54Q9BYV2 358 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 DHX35Q9H5Z1 703 aaKnown RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 LCA5Q86VQ0 697 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 RASSF3Q86WH2 238 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 CPB1P15086 417 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 STAT5BP51692 787 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 AP1B1Q10567 949 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 ST13P4Q8IZP2 240 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 EFHBQ8N7U6 833 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 TTC7AQ9ULT0 858 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 GOLGA8MH3BSY2 632 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 FOXP2O15409 715 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 TADA2BQ86TJ2 420 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 PIP4K2CQ8TBX8 421 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 BTBD6Q96KE9 485 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 POLR3CQ9BUI4 534 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-206ENST00000493232 ADGRG1Q9Y653 693 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 AP3B1O00203 1094 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 PRKCBP05771 671 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 ZFP69BQ9UJL9 534 aa17.29■□□□□ 0.36
BRAT1-206ENST00000493232 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 E2F6O75461 281 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 DGAT1O75907 488 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 PTK2BQ14289 1009 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ARID5BQ14865 1188 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 XKR3Q5GH77 459 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 STRIP1Q5VSL9 837 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 PIDD1Q9HB75 910 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 PP2D1A8MPX8 630 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 EEF1DP29692 281 aaKnown RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 PDIA2Q13087 525 aaKnown RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 NME3Q13232 169 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ZBTB41Q5SVQ8 909 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ZNF746Q6NUN9 644 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 KCNH4Q9UQ05 1017 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 TULP4Q9NRJ4 1543 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 HAUS5O94927 633 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 PEX19P40855 299 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 COG2Q14746 738 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 HABP4Q5JVS0 413 aaKnown RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 CCNYL1Q8N7R7 359 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 AGPAT1Q99943 283 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 NDE1Q9NXR1 346 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ZNRF3Q9ULT6 936 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 ZBBXA8MT70 800 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 APOL1O14791 398 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 TBX3O15119 743 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 HDLBPQ00341 1268 aaKnown RBP17.28■□□□□ 0.36
BRAT1-206ENST00000493232 SBK1Q52WX2 424 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 EPAS1Q99814 870 aa17.28■□□□□ 0.36
BRAT1-206ENST00000493232 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 MYO1DO94832 1006 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms