RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 ZSWIM2Q8NEG5 633 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 EEF2KMTQ96G04 330 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 SCLYQ96I15 445 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 ZBTB45Q96K62 511 aaPredicted RBP10.27□□□□□ -0.76
CSTF1-206ENST00000493039 PPP1R12CQ9BZL4 782 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 C2orf40Q9H1Z8 148 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 HIPK3Q9H422 1215 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 TMEM39AQ9NV64 488 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 PHLPP2Q6ZVD8 1323 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 LAMA3Q16787 3333 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
CSTF1-206ENST00000493039 PIGRP01833 764 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 RPLP2P05387 115 aaKnown RBP10.27□□□□□ -0.77
CSTF1-206ENST00000493039 GHRP10912 638 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 SSR1P43307 286 aaKnown RBP10.27□□□□□ -0.77
CSTF1-206ENST00000493039 CCL23P55773 120 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 STX17P56962 302 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 ALCAMQ13740 583 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 TCTN1Q2MV58 587 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 EEF1DP3Q658K8 133 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 LRRC8DQ7L1W4 858 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 NELFBQ8WX92 580 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 DHTKD1Q96HY7 919 aaPredicted RBP10.27□□□□□ -0.77
CSTF1-206ENST00000493039 SCLT1Q96NL6 688 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 ACCSQ96QU6 501 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.77
CSTF1-206ENST00000493039 DUSP9Q99956 384 aaKnown RBP10.27□□□□□ -0.77
CSTF1-206ENST00000493039 TRAIPQ9BWF2 469 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 ST3GAL5Q9UNP4 418 aa10.27□□□□□ -0.77
CSTF1-206ENST00000493039 SIP14410 1827 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 A0A1B0GUA9 196 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 H0YCG3 227 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 TPM2P07951 284 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 PROZP22891 400 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 CCNE1P24864 410 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 CD52P31358 61 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 BFSP2Q13515 415 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 NCAPHQ15003 741 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 IQCB1Q15051 598 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 P2RX5Q93086 422 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 CPB2Q96IY4 423 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 CBWD1Q9BRT8 395 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 GTPBP4Q9BZE4 634 aaKnown RBP10.26□□□□□ -0.77
CSTF1-206ENST00000493039 HSD3B7Q9H2F3 369 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 TMX1Q9H3N1 280 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 PRMT7Q9NVM4 692 aaPredicted RBP10.26□□□□□ -0.77
CSTF1-206ENST00000493039 PADI3Q9ULW8 664 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 TRAF3IP3Q9Y228 551 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 STYXL1Q9Y6J8 313 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 PDXKO00764 312 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 FAM189A1O60320 539 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 MGEA5O60502 916 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 SCP2P22307 547 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 ERCC5P28715 1186 aaPredicted RBP10.26□□□□□ -0.77
CSTF1-206ENST00000493039 ZKSCAN8Q15776 578 aaPredicted RBP10.26□□□□□ -0.77
CSTF1-206ENST00000493039 RTN4RL1Q86UN2 441 aaPredicted RBP10.26□□□□□ -0.77
CSTF1-206ENST00000493039 RNF217Q8TC41 542 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 PRIMPOLQ96LW4 560 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 GBP3Q9H0R5 595 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 TMEM206Q9H813 350 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 ERVK-5Q9HDB9 667 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 AGPAT3Q9NRZ7 376 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 DMAC2Q9NW81 257 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 RWDD2AQ9UIY3 292 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 CTNND2Q9UQB3 1225 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 SQORQ9Y6N5 450 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 UBE4BO95155 1302 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 CNTNAP2Q9UHC6 1331 aa10.26□□□□□ -0.77
CSTF1-206ENST00000493039 TET1Q8NFU7 2136 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 CEP290O15078 2479 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 GOLGA6CA6NDK9 693 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 GOLGA6BA6NDN3 693 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 M0QZ92 97 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 PSMA7O14818 248 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 HNRNPDLO14979 420 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 CLIC2O15247 247 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 RPS6KA5O75582 802 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 TIMP1P01033 207 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 GOLGA6DP0CG33 693 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 STRN3Q13033 797 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 PAK1Q13153 545 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 PRPF4BQ13523 1007 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 ZPBP2Q6X784 338 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 STXBP4Q6ZWJ1 553 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 CATSPER4Q7RTX7 472 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 IRF2BP1Q8IU81 584 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 DHX40Q8IX18 779 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 TMEM174Q8WUU8 243 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 MRPL4Q9BYD3 311 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 AGPAT5Q9NUQ2 364 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 TYW1Q9NV66 732 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 GOLGA6AQ9NYA3 693 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 TNFSF13BQ9Y275 285 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms