RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 GCLMP48507 274 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 EFNA5P52803 228 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 INHBEP58166 350 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 MCCD1P59942 119 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 CYP27A1Q02318 531 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 ARID5AQ03989 594 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 SREBF2Q12772 1141 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 DRP2Q13474 957 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 IRF5Q13568 498 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 ACVR2BQ13705 512 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 TFDP1Q14186 410 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 DUSP28Q4G0W2 176 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 MORN1Q5T089 497 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 C1orf220Q5T0J3 134 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 GJB7Q6PEY0 223 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 ZPBP2Q6X784 338 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 IFNL1Q8IU54 200 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 LRRC71Q8N4P6 559 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 PARD3BQ8TEW8 1205 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 PRPF31Q8WWY3 499 aaKnown RBP9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 FAM213AQ9BRX8 229 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 STK33Q9BYT3 514 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 SUGCTQ9HAC7 445 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 TMEM8AQ9HCN3 771 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 TRIM10Q9UDY6 481 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 DNAJC12Q9UKB3 198 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 GUCA1BQ9UMX6 200 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 STYXL1Q9Y6J8 313 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 TLL2Q9Y6L7 1015 aa9.93□□□□□ -0.82
SMARCC1-208ENST00000492896 CASP8AP2Q9UKL3 1982 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 RALGAPA2Q2PPJ7 1873 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 ATP8B3O60423 1300 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 F8VZ95 297 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 CTIFO43310 598 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 LDHAP00338 332 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 PRKCBP05771 671 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 MMP3P08254 477 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 CCDC172P0C7W6 258 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 ZNF286BP0CG31 522 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 SMPD1P17405 629 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 MATR3P43243 847 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 GFPT1Q06210 699 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 LAMTOR4Q0VGL1 99 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 PSMD6Q15008 389 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 ENOX2Q16206 610 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 SLC18A3Q16572 532 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 KRT39Q6A163 491 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 IQSEC1Q6DN90 963 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 C17orf99Q6UX52 265 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 VPS36Q86VN1 386 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 LMO3Q8TAP4 145 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 TRAPPC12Q8WVT3 735 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 SOCS4Q8WXH5 440 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 CCDC127Q96BQ5 260 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 ERO1AQ96HE7 468 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 NAPGQ99747 312 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 TARS2Q9BW92 718 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 MRPL4Q9BYD3 311 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 TMEM117Q9H0C3 514 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 ZFYVE28Q9HCC9 887 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 SUCLA2Q9P2R7 463 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 AGO2Q9UKV8 859 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 TFR2Q9UP52 801 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 USP20Q9Y2K6 914 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 MRFAP1Q9Y605 127 aa9.92□□□□□ -0.82
SMARCC1-208ENST00000492896 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 TULP1O00294 542 aaPredicted RBP9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 MAGEB2O15479 319 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 ASAP2O43150 1006 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 PJA2O43164 708 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 EVI5O60447 810 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 GFPT2O94808 682 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 C22orf31O95567 290 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 ABL1P00519 1130 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 HOXC6P09630 235 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 HOXD8P13378 290 aaPredicted RBP9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 RGS2P41220 211 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 CLCN3P51790 818 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 NLRP11P59045 1033 aaKnown RBP9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 IGBP1P78318 339 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 MAP2K1Q02750 393 aaPredicted RBP9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 TNFAIP2Q03169 654 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 TUBB2AQ13885 445 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 MAPK6Q16659 721 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 ARHGAP44Q17R89 818 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 C10orf76Q5T2E6 689 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 EFCAB12Q6NXP0 572 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 IRF2BP2Q7Z5L9 587 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 RHPN2Q8IUC4 686 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 RNF149Q8NC42 400 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 MNS1Q8NEH6 495 aa9.91□□□□□ -0.82
SMARCC1-208ENST00000492896 SECISBP2LQ93073 1101 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms