RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 PRR16Q569H4 304 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 COLGALT2Q8IYK4 626 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 FGF14Q92915 247 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 ZMYND12Q9H0C1 365 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 IFT122Q9HBG6 1241 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 SPATA6Q9NWH7 488 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-209ENST00000492878 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
EPHB4-209ENST00000492878 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
EPHB4-209ENST00000492878 SMG5Q9UPR3 1016 aaKnown RBP17.1■□□□□ 0.33
EPHB4-209ENST00000492878 MTF2Q9Y483 593 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-209ENST00000492878 TGM5O43548 720 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-209ENST00000492878 REC8O95072 547 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 SPATA31D3P0C874 917 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 HOXA11P31270 313 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-209ENST00000492878 SFNP31947 248 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 DSC1Q08554 894 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 RSPO2Q6UXX9 243 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-209ENST00000492878 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 GET4Q7L5D6 327 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-209ENST00000492878 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 ATRIPQ8WXE1 791 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 RIT2Q99578 217 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-209ENST00000492878 DOCK6Q96HP0 2047 aa17.09■□□□□ 0.33
EPHB4-209ENST00000492878 DCDC2BA2VCK2 349 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 MSH4O15457 936 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 GAS2O43903 313 aaKnown RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 POMCP01189 267 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 DNM2P50570 870 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 JAK3P52333 1124 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 CSTF1Q05048 431 aaKnown RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 MLF2Q15773 248 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 XKR3Q5GH77 459 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 PARM1Q6UWI2 310 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 SLC5A5Q92911 643 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 PHKBQ93100 1093 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 PARD6AQ9NPB6 346 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 FNIP2Q9P278 1114 aa17.08■□□□□ 0.32
EPHB4-209ENST00000492878 SUCLA2Q9P2R7 463 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-209ENST00000492878 FAM208BQ5VWN6 2430 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 TMEM150BA6NC51 233 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 TBC1D4O60343 1298 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 MYBP10242 640 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
EPHB4-209ENST00000492878 KRT32Q14532 448 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 RTN1Q16799 776 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 MTERF2Q49AM1 385 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 SLC44A4Q53GD3 710 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 B3GNT9Q6UX72 402 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 RHPN2Q8IUC4 686 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 KSR1Q8IVT5 923 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 REXO1Q8N1G1 1221 aaKnown RBP17.07■□□□□ 0.32
EPHB4-209ENST00000492878 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
EPHB4-209ENST00000492878 RDM1Q8NG50 284 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 UNC45AQ9H3U1 944 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 PIDD1Q9HB75 910 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.07■□□□□ 0.32
EPHB4-209ENST00000492878 CDH7Q9ULB5 785 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
EPHB4-209ENST00000492878 PRG3Q9Y2Y8 225 aaPredicted RBP17.07■□□□□ 0.32
EPHB4-209ENST00000492878 FAM170BA6NMN3 283 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 F8W810 466 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 ZMYND10O75800 440 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 FSHRP23945 695 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 HSPA4P34932 840 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
EPHB4-209ENST00000492878 FZD5Q13467 585 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 PALB2Q86YC2 1186 aa17.06■□□□□ 0.32
EPHB4-209ENST00000492878 SMG8Q8ND04 991 aaKnown RBP17.06■□□□□ 0.32
EPHB4-209ENST00000492878 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-209ENST00000492878 ZBTB43O43298 467 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 GAS7O60861 476 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 PSMD10O75832 226 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 TDGF1P13385 188 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 CDC27P30260 824 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 KCNB2Q92953 911 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 FAM126AQ9BYI3 521 aaPredicted RBP17.05■□□□□ 0.32
EPHB4-209ENST00000492878 MINDY3Q9H8M7 445 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
EPHB4-209ENST00000492878 FRYQ5TBA9 3013 aa17.04■□□□□ 0.32
EPHB4-209ENST00000492878 SHISA7A6NL88 538 aa17.04■□□□□ 0.32
EPHB4-209ENST00000492878 SLC30A4O14863 429 aa17.04■□□□□ 0.32
EPHB4-209ENST00000492878 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
EPHB4-209ENST00000492878 CHMP2AO43633 222 aa17.04■□□□□ 0.32
EPHB4-209ENST00000492878 OR1G1P47890 313 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms