RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 EPS8L1Q8TE68 723 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 RAPGEF5Q92565 580 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 TMEM117Q9H0C3 514 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PABPC3Q9H361 631 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 CHORDC1Q9UHD1 332 aaPredicted RBP17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 MAPK13O15264 365 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 HSPA6P17066 643 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 COMTP21964 271 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 CHRNA3P32297 505 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PTGER2P43116 358 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PLTPP55058 493 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 GTF2BQ00403 316 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 QPCTQ16769 361 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 TTC27Q6P3X3 843 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 HAUS6Q7Z4H7 955 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 FAM71AQ8IYT1 594 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PRPF38AQ8NAV1 312 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 FBXO25Q8TCJ0 367 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PCYOX1Q9UHG3 505 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 DDX20Q9UHI6 824 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 RASAL2Q9UJF2 1139 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PCDHA3Q9Y5H8 950 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 PMM2O15305 246 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 PPIP5K2O43314 1243 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 CAND2O75155 1236 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 ICAM1P05362 532 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 PMS2P54278 862 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 IFT88Q13099 833 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 SPP2Q13103 211 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 KCNV1Q6PIU1 500 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 NIPA1Q7RTP0 329 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 SUGP1Q8IWZ8 645 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 CD101Q93033 1021 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 CNKSR1Q969H4 720 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 KREMEN1Q96MU8 473 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 ST6GALNAC4Q9H4F1 302 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 AGO4Q9HCK5 861 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 CCPG1Q9ULG6 757 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 NFIBO00712 420 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 ADRB2P07550 413 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 GZMAP12544 262 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 CAP2P40123 477 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 USP8P40818 1118 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 MXI1P50539 228 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 MCCD1P59942 119 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 MESDQ14696 234 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 RNF25Q96BH1 459 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 SH2D3AQ9BRG2 576 aa17.37■□□□□ 0.37
SEMA4D-220ENST00000492386 TMEM150BA6NC51 233 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 C5orf60A6NFR6 353 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 PLSCR1O15162 318 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 ATMINO43313 823 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 LYPLA2O95372 231 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 HNRNPH1P31943 449 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 RPL21P46778 160 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 QARSP47897 775 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 HOOK3Q86VS8 718 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 CLEC4DQ8WXI8 215 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 ACP6Q9NPH0 428 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 UBIAD1Q9Y5Z9 338 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 GGPS1O95749 300 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 PYGMP11217 842 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 ALAS1P13196 640 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 TNIP1Q15025 636 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 RNF187Q5TA31 235 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 SLC47A2Q86VL8 602 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 WNT8AQ9H1J5 351 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 CNOT10Q9H9A5 744 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 TRPC6Q9Y210 931 aa17.36■□□□□ 0.37
SEMA4D-220ENST00000492386 TCRBV7S2A1N4TA0A589 114 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 BACH1O14867 736 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 SLC16A4O15374 487 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 CYP26A1O43174 497 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 YWHABP31946 246 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 MRPS9P82933 396 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 RSBN1LQ6PCB5 846 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 CPNE8Q86YQ8 564 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 MDM1Q8TC05 714 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 SHC3Q92529 594 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 SEMA4DQ92854 862 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 PGM2Q96G03 612 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 TMEM39BQ9GZU3 492 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 GPRC5CQ9NQ84 441 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 PNMA2Q9UL42 364 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 GOLGA8IPA6NC78 632 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 GOLGA8JA6NMD2 632 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 TBC1D12O60347 775 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 CYP1A2P05177 515 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 MMEP08473 750 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 NCKAP1LP55160 1127 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 SNRPFP62306 86 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 FMO1Q01740 532 aa17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 BYSLQ13895 437 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-220ENST00000492386 RASA3Q14644 834 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms