RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FZD8Q9H461 694 aa16.67■□□□□ 0.26
USP39-217ENST00000491659 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 ZMYM2Q9UBW7 1377 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 A0A1B0GUA9 196 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 POMCP01189 267 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 SRGAP2BP0DMP2 458 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 LIG1P18858 919 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 CA8P35219 290 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 MLH1P40692 756 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 EFNA5P52803 228 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 DLX2Q07687 328 aaPredicted RBP16.66■□□□□ 0.26
USP39-217ENST00000491659 PRPF4BQ13523 1007 aaKnown RBP16.66■□□□□ 0.26
USP39-217ENST00000491659 CLUL1Q15846 466 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 DUSP6Q16828 381 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 HYIQ5T013 277 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 CDR2LQ86X02 465 aaPredicted RBP16.66■□□□□ 0.26
USP39-217ENST00000491659 KCTD17Q8N5Z5 321 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 DRC1Q96MC2 740 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 ADPGKQ9BRR6 497 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 TMEM175Q9BSA9 504 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 NXF3Q9H4D5 531 aaKnown RBP16.66■□□□□ 0.26
USP39-217ENST00000491659 DNAJB4Q9UDY4 337 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 HES2Q9Y543 173 aa16.66■□□□□ 0.26
USP39-217ENST00000491659 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 PER2O15055 1255 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 HIP1RO75146 1068 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 SSBP05455 408 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP39-217ENST00000491659 GALTP07902 379 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 SLC11A1P49279 550 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 DMP1Q13316 513 aaPredicted RBP16.65■□□□□ 0.26
USP39-217ENST00000491659 SMAD4Q13485 552 aaKnown RBP16.65■□□□□ 0.26
USP39-217ENST00000491659 CABP7Q86V35 215 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 TMEM173Q86WV6 379 aaPredicted RBP16.65■□□□□ 0.26
USP39-217ENST00000491659 ZNF280BQ86YH2 543 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 GAD1Q99259 594 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 RUSC1Q9BVN2 902 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 TIPINQ9BVW5 301 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 STK39Q9UEW8 545 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 GIT1Q9Y2X7 761 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
USP39-217ENST00000491659 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 ACKR2O00590 384 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 INPPL1O15357 1258 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 SLC26A4O43511 780 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 DDHD2O94830 711 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 SYT1P21579 422 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 UBA7P41226 1012 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 SCNN1GP51170 649 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 AFF1P51825 1210 aaKnown RBP16.64■□□□□ 0.25
USP39-217ENST00000491659 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
USP39-217ENST00000491659 RINT1Q6NUQ1 792 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 VPS52Q8N1B4 723 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 RASSF8Q8NHQ8 419 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 CALML4Q96GE6 196 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 ZFP42Q96MM3 310 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 PNMA5Q96PV4 448 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 RPS6KC1Q96S38 1066 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 PLIN2Q99541 437 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 ZBP1Q9H171 429 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 PDZD7Q9H5P4 517 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 POLD4Q9HCU8 107 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 PARP2Q9UGN5 583 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 BARX2Q9UMQ3 279 aaPredicted RBP16.64■□□□□ 0.25
USP39-217ENST00000491659 FAN1Q9Y2M0 1017 aa16.64■□□□□ 0.25
USP39-217ENST00000491659 HIDE1A8MVS5 230 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 MBTPS2O43462 519 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 B4GALT3O60512 393 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 NR1I2O75469 434 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 GLP2RO95838 553 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 ALDH2P05091 517 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 AKAP5P24588 427 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 LONP1P36776 959 aaKnown RBP16.63■□□□□ 0.25
USP39-217ENST00000491659 PEX3P56589 373 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 APBB1IPQ7Z5R6 666 aaPredicted RBP16.63■□□□□ 0.25
USP39-217ENST00000491659 DDX53Q86TM3 631 aaKnown RBP16.63■□□□□ 0.25
USP39-217ENST00000491659 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 TMEM87AQ8NBN3 555 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 MSLNLQ96KJ4 702 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 KCND2Q9NZV8 630 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 CLEC1BQ9P126 229 aa16.63■□□□□ 0.25
USP39-217ENST00000491659 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
USP39-217ENST00000491659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
USP39-217ENST00000491659 C2orf71A6NGG8 1288 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 K7ERI5 159 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 SSTR3P32745 418 aaPredicted RBP16.62■□□□□ 0.25
USP39-217ENST00000491659 NPTX2P47972 431 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 GRIK3Q13003 919 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 COASYQ13057 564 aa16.62■□□□□ 0.25
USP39-217ENST00000491659 RESTQ13127 1097 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms