RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 PRKCBP05771 671 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 XRCC6P12956 609 aaKnown RBP eCLIP15.05■□□□□ -0
TRAIP-211ENST00000491060 CYP11B2P19099 503 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 PPM1AP35813 382 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 PLCB3Q01970 1234 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ -0
TRAIP-211ENST00000491060 UBE3AQ05086 875 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 ORC2Q13416 577 aaPredicted RBP15.05■□□□□ -0
TRAIP-211ENST00000491060 SMC1AQ14683 1233 aaKnown RBP15.05■□□□□ -0
TRAIP-211ENST00000491060 CSPP1Q1MSJ5 1256 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 CTC1Q2NKJ3 1217 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 MRPL10Q7Z7H8 261 aaKnown RBP15.05■□□□□ -0
TRAIP-211ENST00000491060 RUSC1Q9BVN2 902 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 RAB34Q9BZG1 259 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 CXCL16Q9H2A7 254 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 GDAQ9Y2T3 454 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 TTC28Q96AY4 2481 aa15.05■□□□□ -0
TRAIP-211ENST00000491060 NPHP3-ACAD11A0A0J9YXS1 232 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 ARL5CA6NH57 179 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 ZNF623O75123 536 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 HIP1RO75146 1068 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 HARSP12081 509 aaKnown RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 NCLP19338 710 aaKnown RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 MCM2P49736 904 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 PRPF4BQ13523 1007 aaKnown RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 RILPL1Q5EBL4 403 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 EEF1DP3Q658K8 133 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 FAM173BQ6P4H8 233 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 GLYCTKQ8IVS8 523 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 C12orf76Q8N812 135 aaPredicted RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 HASPINQ8TF76 798 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 IGSF21Q96ID5 467 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 CDK5RAP3Q96JB5 506 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 B3GALT6Q96L58 329 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 IFT74Q96LB3 600 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 VN1R3Q9BXE9 311 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 BACH2Q9BYV9 841 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 SNTG2Q9NY99 539 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 FAN1Q9Y2M0 1017 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 USP15Q9Y4E8 981 aaPredicted RBP15.04■□□□□ -0
TRAIP-211ENST00000491060 GTF3C3Q9Y5Q9 886 aa15.04■□□□□ -0
TRAIP-211ENST00000491060 PLXNA3P51805 1871 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 C2orf71A6NGG8 1288 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 NRP1O14786 923 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 NCK2O43639 380 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 CLASP2O75122 1294 aaKnown RBP15.03■□□□□ -0
TRAIP-211ENST00000491060 PEX3P56589 373 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 OSTNP61366 133 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 GRIN1Q05586 938 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 SMAD4Q13485 552 aaKnown RBP15.03■□□□□ -0
TRAIP-211ENST00000491060 SLC27A1Q6PCB7 646 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 TAS1R1Q7RTX1 841 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 ZBTB33Q86T24 672 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 IGSF22Q8N9C0 903 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 SPRYD3Q8NCJ5 442 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 RASSF8Q8NHQ8 419 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 FEZF2Q8TBJ5 459 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 RPGRIP1Q96KN7 1286 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 PNMA5Q96PV4 448 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 MMTAG2Q9BU76 263 aaKnown RBP15.03■□□□□ -0
TRAIP-211ENST00000491060 TRAIPQ9BWF2 469 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 PDZD7Q9H5P4 517 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 DNM3Q9UQ16 869 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 FAM50BQ9Y247 325 aa15.03■□□□□ -0
TRAIP-211ENST00000491060 CNTNAP2Q9UHC6 1331 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 EYA4O95677 639 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 EPCAMP16422 314 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 AXLP30530 894 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 ATP2C1P98194 919 aaPredicted RBP15.02■□□□□ -0
TRAIP-211ENST00000491060 ZP2Q05996 745 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 PDIA5Q14554 519 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 COL19A1Q14993 1142 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 MAPK6Q16659 721 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 PUS10Q3MIT2 529 aaKnown RBP15.02■□□□□ -0
TRAIP-211ENST00000491060 SPECC1Q5M775 1068 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 RARS2Q5T160 578 aaKnown RBP15.02■□□□□ -0
TRAIP-211ENST00000491060 MSLNLQ96KJ4 702 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 RPS6KC1Q96S38 1066 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 ZBP1Q9H171 429 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 TSHZ2Q9NRE2 1034 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 PRMT7Q9NVM4 692 aaPredicted RBP15.02■□□□□ -0
TRAIP-211ENST00000491060 LZTS1Q9Y250 596 aa15.02■□□□□ -0
TRAIP-211ENST00000491060 CASTOR2A6NHX0 329 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 TULP1O00294 542 aaPredicted RBP15.01□□□□□ -0.01
TRAIP-211ENST00000491060 SLC16A4O15374 487 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 ALDH2P05091 517 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 SF3A1Q15459 793 aaKnown RBP15.01□□□□□ -0.01
TRAIP-211ENST00000491060 GLRA4Q5JXX5 417 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 ANKRD54Q6NXT1 300 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 FAM43BQ6ZT52 329 aaPredicted RBP15.01□□□□□ -0.01
TRAIP-211ENST00000491060 CABP7Q86V35 215 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 IFNLR1Q8IU57 520 aaPredicted RBP15.01□□□□□ -0.01
TRAIP-211ENST00000491060 CNNM3Q8NE01 707 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 C2orf40Q9H1Z8 148 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 NGRNQ9NPE2 291 aaKnown RBP15.01□□□□□ -0.01
TRAIP-211ENST00000491060 HCFC2Q9Y5Z7 792 aa15.01□□□□□ -0.01
TRAIP-211ENST00000491060 LAD1O00515 517 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms