RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CUL4AQ13619 759 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 FAM187BQ17R55 369 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 GJD3Q8N144 294 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 KCTD17Q8N5Z5 321 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 IGSF21Q96ID5 467 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 POP1Q99575 1024 aaKnown RBP19.28■□□□□ 0.68
SEC13-218ENST00000490283 ADPGKQ9BRR6 497 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 TMEM175Q9BSA9 504 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 NT5C3AQ9H0P0 336 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 GIT1Q9Y2X7 761 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 PLXNA4Q9HCM2 1894 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 REV3LO60673 3130 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 A0A1B0GUA9 196 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 PP2D1A8MPX8 630 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 MBTPS2O43462 519 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 PRKCBP05771 671 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 MLH1P40692 756 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 SLC11A1P49279 550 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 GIT2Q14161 759 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 APBB1IPQ7Z5R6 666 aaPredicted RBP19.27■□□□□ 0.68
SEC13-218ENST00000490283 DDX53Q86TM3 631 aaKnown RBP19.27■□□□□ 0.68
SEC13-218ENST00000490283 VPS52Q8N1B4 723 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 FZD8Q9H461 694 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 DNAJB4Q9UDY4 337 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 DAXXQ9UER7 740 aaPredicted RBP19.27■□□□□ 0.68
SEC13-218ENST00000490283 BARX2Q9UMQ3 279 aaPredicted RBP19.27■□□□□ 0.68
SEC13-218ENST00000490283 FAN1Q9Y2M0 1017 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 HES2Q9Y543 173 aa19.27■□□□□ 0.68
SEC13-218ENST00000490283 ARL5CA6NH57 179 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 E9PMD0 336 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 CDC25AP30304 524 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 COASYQ13057 564 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 SMAD2Q15796 467 aaKnown RBP19.26■□□□□ 0.67
SEC13-218ENST00000490283 IL17AQ16552 155 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 CDR2LQ86X02 465 aaPredicted RBP19.26■□□□□ 0.67
SEC13-218ENST00000490283 ZNF280BQ86YH2 543 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 MRPL43Q8N983 215 aaKnown RBP19.26■□□□□ 0.67
SEC13-218ENST00000490283 BSNDQ8WZ55 320 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 MSLNLQ96KJ4 702 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 AK8Q96MA6 479 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 DRC1Q96MC2 740 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 RPS6KC1Q96S38 1066 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 GAD1Q99259 594 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 NXF3Q9H4D5 531 aaKnown RBP19.26■□□□□ 0.67
SEC13-218ENST00000490283 PARP2Q9UGN5 583 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 XIRP2A4UGR9 3374 aa19.26■□□□□ 0.67
SEC13-218ENST00000490283 PHLPP2Q6ZVD8 1323 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.25■□□□□ 0.67
SEC13-218ENST00000490283 HIDE1A8MVS5 230 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 ACKR2O00590 384 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 DDHD2O94830 711 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 CXCL14O95715 111 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 GLP2RO95838 553 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 SSBP05455 408 aaKnown RBP eCLIP19.25■□□□□ 0.67
SEC13-218ENST00000490283 DMP1Q13316 513 aaPredicted RBP19.25■□□□□ 0.67
SEC13-218ENST00000490283 LLGL2Q6P1M3 1020 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 ADHFE1Q8IWW8 467 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 SMRP1Q8NCR6 262 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 TIPINQ9BVW5 301 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 C1QTNF1Q9BXJ1 281 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 CLEC1BQ9P126 229 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 ATG2AQ2TAZ0 1938 aa19.25■□□□□ 0.67
SEC13-218ENST00000490283 ZMYM2Q9UBW7 1377 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 C2orf71A6NGG8 1288 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 CCDC169A6NNP5 214 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 INPPL1O15357 1258 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 SLC26A4O43511 780 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 CTSAP10619 480 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 AKAP5P24588 427 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 OR1G1P47890 313 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 SCNN1GP51170 649 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 TMEM173Q86WV6 379 aaPredicted RBP19.24■□□□□ 0.67
SEC13-218ENST00000490283 RASSF8Q8NHQ8 419 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 CASP10Q92851 521 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 CALML4Q96GE6 196 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 ZFP42Q96MM3 310 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 MMTAG2Q9BU76 263 aaKnown RBP19.24■□□□□ 0.67
SEC13-218ENST00000490283 ZBP1Q9H171 429 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 KCNG1Q9UIX4 513 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 PRG3Q9Y2Y8 225 aaPredicted RBP19.24■□□□□ 0.67
SEC13-218ENST00000490283 NCOR1O75376 2440 aa19.24■□□□□ 0.67
SEC13-218ENST00000490283 K7ERI5 159 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 NRP1O14786 923 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 HIP1RO75146 1068 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 UBA7P41226 1012 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 AFF1P51825 1210 aaKnown RBP19.23■□□□□ 0.67
SEC13-218ENST00000490283 PEX3P56589 373 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 ZP2Q05996 745 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 DCAF4L1Q3SXM0 396 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 HYIQ5T013 277 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 TMEM184AQ6ZMB5 413 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 CABP7Q86V35 215 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
SEC13-218ENST00000490283 KIFC3Q9BVG8 833 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 CCDC113Q9H0I3 377 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 PDZD7Q9H5P4 517 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 C17orf75Q9HAS0 396 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 POLD4Q9HCU8 107 aa19.23■□□□□ 0.67
SEC13-218ENST00000490283 K7ELQ4 463 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms