RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 POLD4Q9HCU8 107 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 KANSL3Q9P2N6 904 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 CD207Q9UJ71 328 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 A0A1B0GUA9 196 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 GLP2RO95838 553 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 POMCP01189 267 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 GALTP07902 379 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 LIG1P18858 919 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 MLH1P40692 756 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 SLC11A1P49279 550 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 AFF1P51825 1210 aaKnown RBP21.82■■□□□ 1.08
SMC4-222ENST00000490207 SMAD4Q13485 552 aaKnown RBP21.82■■□□□ 1.08
SMC4-222ENST00000490207 SMC1AQ14683 1233 aaKnown RBP21.82■■□□□ 1.08
SMC4-222ENST00000490207 MAPK6Q16659 721 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 TMEM132AQ24JP5 1023 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 HYIQ5T013 277 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 KCNK18Q7Z418 384 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 IGSF21Q96ID5 467 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 KIFC3Q9BVG8 833 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 CCDC113Q9H0I3 377 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 NT5C3AQ9H0P0 336 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 RNF39Q9H2S5 420 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 BARX2Q9UMQ3 279 aaPredicted RBP21.82■■□□□ 1.08
SMC4-222ENST00000490207 NCOR1O75376 2440 aa21.82■■□□□ 1.08
SMC4-222ENST00000490207 ARL5CA6NH57 179 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 HIDE1A8MVS5 230 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 K7ELQ4 463 aaPredicted RBP21.81■■□□□ 1.08
SMC4-222ENST00000490207 N4BP3O15049 544 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 INPPL1O15357 1258 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 MBTPS2O43462 519 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 DDHD2O94830 711 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 BMP15O95972 392 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 CA8P35219 290 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 PRPF4BQ13523 1007 aaKnown RBP21.81■■□□□ 1.08
SMC4-222ENST00000490207 FAM178BQ8IXR5 827 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 BCL7CQ8WUZ0 217 aaPredicted RBP21.81■■□□□ 1.08
SMC4-222ENST00000490207 CDK5RAP3Q96JB5 506 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 MSLNLQ96KJ4 702 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 PNMA5Q96PV4 448 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 GAD1Q99259 594 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 TMEM175Q9BSA9 504 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 RUSC1Q9BVN2 902 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 CLEC1BQ9P126 229 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 GIT1Q9Y2X7 761 aa21.81■■□□□ 1.08
SMC4-222ENST00000490207 MYH15Q9Y2K3 1946 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 ZMYM2Q9UBW7 1377 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 SCNN1GP51170 649 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 BMS1Q14692 1282 aaKnown RBP21.8■■□□□ 1.08
SMC4-222ENST00000490207 DDX53Q86TM3 631 aaKnown RBP21.8■■□□□ 1.08
SMC4-222ENST00000490207 VPS52Q8N1B4 723 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 INTS4Q96HW7 963 aaKnown RBP21.8■■□□□ 1.08
SMC4-222ENST00000490207 AK8Q96MA6 479 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 ZBP1Q9H171 429 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 PDZD7Q9H5P4 517 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 GTF3C3Q9Y5Q9 886 aa21.8■■□□□ 1.08
SMC4-222ENST00000490207 TTLL13PA6NNM8 815 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 ACKR2O00590 384 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 HIP1RO75146 1068 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 EDN1P05305 212 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 SRGAP2BP0DMP2 458 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 AKAP5P24588 427 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 EFNA5P52803 228 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 RBM10P98175 930 aaKnown RBP21.79■■□□□ 1.08
SMC4-222ENST00000490207 SF3A1Q15459 793 aaKnown RBP21.79■■□□□ 1.08
SMC4-222ENST00000490207 RINT1Q6NUQ1 792 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 CABP7Q86V35 215 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 KCTD17Q8N5Z5 321 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 VN1R2Q8NFZ6 395 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 DRC1Q96MC2 740 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 ZFP42Q96MM3 310 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 PLIN2Q99541 437 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 BDP1A6H8Y1 2624 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 PHLPP2Q6ZVD8 1323 aa21.79■■□□□ 1.08
SMC4-222ENST00000490207 C2orf71A6NGG8 1288 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 SYT1P21579 422 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 PEX3P56589 373 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 COASYQ13057 564 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 DMP1Q13316 513 aaPredicted RBP21.78■■□□□ 1.08
SMC4-222ENST00000490207 SMAD2Q15796 467 aaKnown RBP21.78■■□□□ 1.08
SMC4-222ENST00000490207 TMEM119Q4V9L6 283 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 C1orf186Q6ZWK4 172 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 DAW1Q8N136 415 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 SMRP1Q8NCR6 262 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 ADPGKQ9BRR6 497 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 TIPINQ9BVW5 301 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 FOXD4L1Q9NU39 408 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 MIOSQ9NXC5 875 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 PRKAG3Q9UGI9 489 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 PARP2Q9UGN5 583 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 USP20Q9Y2K6 914 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 FAN1Q9Y2M0 1017 aa21.78■■□□□ 1.08
SMC4-222ENST00000490207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.77■■□□□ 1.08
SMC4-222ENST00000490207 CCDC169A6NNP5 214 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 NRP1O14786 923 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 SLC26A4O43511 780 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 ALDH2P05091 517 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 SSBP05455 408 aaKnown RBP eCLIP21.77■■□□□ 1.08
SMC4-222ENST00000490207 CTSAP10619 480 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 SSTR3P32745 418 aaPredicted RBP21.77■■□□□ 1.08
SMC4-222ENST00000490207 DSC1Q08554 894 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms