RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 CD44P16070 742 aaKnown RBP17.65■□□□□ 0.42
CLIC4-203ENST00000489758 PRCPP42785 496 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 ATF7IP2Q5U623 682 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 CDR2LQ86X02 465 aaPredicted RBP17.65■□□□□ 0.42
CLIC4-203ENST00000489758 ADSSL1Q8N142 457 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 CCDC51Q96ER9 411 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 ADAM2Q99965 735 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 TRAIPQ9BWF2 469 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 FTHL17Q9BXU8 183 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 HAPLN2Q9GZV7 340 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 TSPYL2Q9H2G4 693 aaPredicted RBP17.65■□□□□ 0.42
CLIC4-203ENST00000489758 KCTD10Q9H3F6 313 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 EXOC7Q9UPT5 735 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 PPP1R3GB7ZBB8 358 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 HNRNPDLO14979 420 aaKnown RBP17.64■□□□□ 0.41
CLIC4-203ENST00000489758 TOM1L1O75674 476 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 LIG4P49917 911 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
CLIC4-203ENST00000489758 KNOP1Q1ED39 458 aaKnown RBP17.64■□□□□ 0.41
CLIC4-203ENST00000489758 TMEM240Q5SV17 173 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 NOTUMQ6P988 496 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 ZNF365Q70YC5 407 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 ZBTB45Q96K62 511 aaPredicted RBP17.64■□□□□ 0.41
CLIC4-203ENST00000489758 GDF15Q99988 308 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLIC4-203ENST00000489758 EIF2AQ9BY44 585 aaKnown RBP17.64■□□□□ 0.41
CLIC4-203ENST00000489758 STYXL1Q9Y6J8 313 aa17.64■□□□□ 0.41
CLIC4-203ENST00000489758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.63■□□□□ 0.41
CLIC4-203ENST00000489758 ENPP3O14638 875 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 N4BP3O15049 544 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 ZSCAN20P17040 1043 aaPredicted RBP17.63■□□□□ 0.41
CLIC4-203ENST00000489758 ADSSP30520 456 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 NLRP12P59046 1061 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 FAM189BP81408 668 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 MCL1Q07820 350 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 IKBKEQ14164 716 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 DPCR1Q3MIW9 517 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 ZCWPW2Q504Y3 356 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 SLC27A1Q6PCB7 646 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 PSRC1Q6PGN9 363 aaPredicted RBP17.63■□□□□ 0.41
CLIC4-203ENST00000489758 MPZL3Q6UWV2 235 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 BICD1Q96G01 975 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 CDT1Q9H211 546 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 SEMA6BQ9H3T3 888 aa17.63■□□□□ 0.41
CLIC4-203ENST00000489758 A0A0B4J269 797 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 C9IYK1 514 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 BAIAP3O94812 1187 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 KIF20AO95235 890 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 FGBP02675 491 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 TMEM132AQ24JP5 1023 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 TWF2Q6IBS0 349 aaKnown RBP17.62■□□□□ 0.41
CLIC4-203ENST00000489758 OTOP2Q7RTS6 562 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 CRIPAKQ8N1N5 446 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 MLKLQ8NB16 471 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 GBP3Q9H0R5 595 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 AGPAT3Q9NRZ7 376 aa17.62■□□□□ 0.41
CLIC4-203ENST00000489758 A0A0U1RQF3 1178 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 FAM189A1O60320 539 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 LETM1O95202 739 aaPredicted RBP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 NPTXRO95502 500 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 MCF2P10911 925 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 WDR5P61964 334 aaKnown RBP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 SNRPFP62306 86 aaKnown RBP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 ZNF568Q3ZCX4 644 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 RASIP1Q5U651 963 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 CENPPQ6IPU0 288 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 SLC24A5Q71RS6 500 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 ZBTB33Q86T24 672 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 SMG8Q8ND04 991 aaKnown RBP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 HERVK_113Q902F9 699 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 DHTKD1Q96HY7 919 aaPredicted RBP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 CBWD1Q9BRT8 395 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 FUCA2Q9BTY2 467 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 C1orf112Q9NSG2 853 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 FAM105AQ9NUU6 356 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 TYW1Q9NV66 732 aaKnown RBP17.61■□□□□ 0.41
CLIC4-203ENST00000489758 ANKFY1Q9P2R3 1169 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 TRAF3IP3Q9Y228 551 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 PCDHB2Q9Y5E7 798 aa17.61■□□□□ 0.41
CLIC4-203ENST00000489758 SCN5AQ14524 2016 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 SYCE3A1L190 88 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 PDXKO00764 312 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 CLDN3O15551 220 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 EFCAB14O75071 495 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 ZNF623O75123 536 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 ACTN1P12814 892 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 ATF7P17544 494 aaPredicted RBP17.6■□□□□ 0.41
CLIC4-203ENST00000489758 PPP1R2P41236 205 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 PMS1P54277 932 aaKnown RBP17.6■□□□□ 0.41
CLIC4-203ENST00000489758 NOLC1Q14978 699 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLIC4-203ENST00000489758 DCAF4L1Q3SXM0 396 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 C9orf50Q5SZB4 431 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 SASS6Q6UVJ0 657 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms