RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 RFXAPO00287 272 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 ACKR2O00590 384 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 ZNF623O75123 536 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 STAG3L1P0CL83 205 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 MAPTP10636 758 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 NMT1P30419 496 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 AXLP30530 894 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 EFNA5P52803 228 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 NCKAP1LP55160 1127 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 PRPF4BQ13523 1007 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 PCBP1Q15365 356 aaKnown RBP eCLIP8.65□□□□□ -1.02
SSR1-210ENST00000489567 AGMOQ6ZNB7 445 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 FAM43BQ6ZT52 329 aaPredicted RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 HAUS6Q7Z4H7 955 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 FSIP1Q8NA03 581 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 GUCD1Q96NT3 240 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 IPO9Q96P70 1041 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 CASD1Q96PB1 797 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 C17orf80Q9BSJ5 609 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 FGFBP2Q9BYJ0 223 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 TRIM9Q9C026 710 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 TNMDQ9H2S6 317 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 PDZD7Q9H5P4 517 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 TMEM134Q9H6X4 195 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 MTMR10Q9NXD2 777 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 LARSQ9P2J5 1176 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 MTUS1Q9ULD2 1270 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 IPPQ9Y573 584 aa8.65□□□□□ -1.02
SSR1-210ENST00000489567 MRPL42Q9Y6G3 142 aaKnown RBP8.65□□□□□ -1.02
SSR1-210ENST00000489567 TMEM265A0A087WTH1 108 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 FRMD3A2A2Y4 597 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 TBKBP1A7MCY6 615 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 TRAK2O60296 914 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 TBCAO75347 108 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 NPTXRO95502 500 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 EOMESO95936 686 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 DEKP35659 375 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 AFMP43652 599 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 BTG3Q14201 252 aaPredicted RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 ZC2HC1CQ53FD0 456 aaPredicted RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 LRRC55Q6ZSA7 311 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 MRPL10Q7Z7H8 261 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 HPS3Q969F9 1004 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 ZBTB45Q96K62 511 aaPredicted RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 ACO2Q99798 780 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 TARS2Q9BW92 718 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 BLZF1Q9H2G9 400 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 IKZF4Q9H2S9 585 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 CUEDC2Q9H467 287 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 PRDM12Q9H4Q4 367 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 TBC1D7Q9P0N9 293 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 MYH11P35749 1972 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 FNDC1Q4ZHG4 1894 aaPredicted RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 K7ENM7 598 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 ABLIM1O14639 778 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 SLFN14P0C7P3 912 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 IDEP14735 1019 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 SYKP43405 635 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 RAB27AP51159 221 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 CASP5P51878 434 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 SMTNP53814 917 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 NCBP1Q09161 790 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 KCNA1Q09470 495 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 CUL4BQ13620 913 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 ATF7IP2Q5U623 682 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 SLC27A1Q6PCB7 646 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 FAM178BQ8IXR5 827 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 CMTR2Q8IYT2 770 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 GLIS3Q8NEA6 775 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 ARNTL2Q8WYA1 636 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 MRPS27Q92552 414 aaKnown RBP8.64□□□□□ -1.03
SSR1-210ENST00000489567 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 PAGE5Q96GU1 130 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 C7orf25Q9BPX7 421 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 CXCL16Q9H2A7 254 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 PTPRHQ9HD43 1115 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 PANK4Q9NVE7 773 aa8.64□□□□□ -1.03
SSR1-210ENST00000489567 N4BP3O15049 544 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
SSR1-210ENST00000489567 B4GALT3O60512 393 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 GADD45BO75293 160 aaPredicted RBP8.63□□□□□ -1.03
SSR1-210ENST00000489567 OFD1O75665 1012 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 PPP1R37O75864 691 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 ZNF202O95125 648 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 PROZP22891 400 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 AKAP5P24588 427 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 ERVK-21P61565 698 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 ASIC1P78348 528 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 GTF2BQ00403 316 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 COASYQ13057 564 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 ADGRE1Q14246 886 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 EPC2Q52LR7 807 aa8.63□□□□□ -1.03
SSR1-210ENST00000489567 HERC4Q5GLZ8 1057 aaPredicted RBP8.63□□□□□ -1.03
SSR1-210ENST00000489567 CNNM4Q6P4Q7 775 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms