RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TRIM6Q9C030 488 aaPredicted RBP25.49■■□□□ 1.67
COL9A3-213ENST00000489045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.48■■□□□ 1.67
COL9A3-213ENST00000489045 GPR37L1O60883 481 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 ALADP13716 330 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 CYP11B2P19099 503 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 MLH1P40692 756 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 CDCA2Q69YH5 1023 aaPredicted RBP25.48■■□□□ 1.67
COL9A3-213ENST00000489045 MCTP1Q6DN14 999 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 TMEM175Q9BSA9 504 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 APOL6Q9BWW8 343 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 VN1R3Q9BXE9 311 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 NXF3Q9H4D5 531 aaKnown RBP25.48■■□□□ 1.67
COL9A3-213ENST00000489045 HCFC2Q9Y5Z7 792 aa25.48■■□□□ 1.67
COL9A3-213ENST00000489045 INPPL1O15357 1258 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 DCXO43602 365 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 CLASP2O75122 1294 aaKnown RBP25.47■■□□□ 1.67
COL9A3-213ENST00000489045 CTSAP10619 480 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 GJB2P29033 226 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 SLC27A1Q6PCB7 646 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 SYCE2Q6PIF2 218 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 ZBTB8OSQ8IWT0 167 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 IGSF22Q8N9C0 903 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 SNX29Q8TEQ0 813 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 BSNDQ8WZ55 320 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 SUSD6Q92537 303 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 GAD1Q99259 594 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 APOL5Q9BWW9 433 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 S1PR5Q9H228 398 aa25.47■■□□□ 1.67
COL9A3-213ENST00000489045 PRMT7Q9NVM4 692 aaPredicted RBP25.47■■□□□ 1.67
COL9A3-213ENST00000489045 ARL5CA6NH57 179 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 NPTXRO95502 500 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 PDIA5Q14554 519 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 PPP4R3CPQ6ZMV5 832 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 CASP10Q92851 521 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 PRIMPOLQ96LW4 560 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 TBC1D32Q96NH3 1257 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 PHF7Q9BWX1 381 aaPredicted RBP25.46■■□□□ 1.67
COL9A3-213ENST00000489045 RAB34Q9BZG1 259 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 BHMT2Q9H2M3 363 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 KIAA1024Q9UPX6 916 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 FAN1Q9Y2M0 1017 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 IRAK3Q9Y616 596 aa25.46■■□□□ 1.67
COL9A3-213ENST00000489045 A0A1B0GUA9 196 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 LAD1O00515 517 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 NRP1O14786 923 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 ALDH2P05091 517 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 SCNN1GP51170 649 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 RNF135Q8IUD6 432 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 HACE1Q8IYU2 909 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 ZFP42Q96MM3 310 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 C2orf40Q9H1Z8 148 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 FZD8Q9H461 694 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.45■■□□□ 1.66
COL9A3-213ENST00000489045 DDX19AQ9NUU7 478 aaKnown RBP25.45■■□□□ 1.66
COL9A3-213ENST00000489045 MIOSQ9NXC5 875 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 GIT1Q9Y2X7 761 aa25.45■■□□□ 1.66
COL9A3-213ENST00000489045 PP2D1A8MPX8 630 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 HOXB8P17481 243 aaPredicted RBP25.44■■□□□ 1.66
COL9A3-213ENST00000489045 AKAP5P24588 427 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 NAMPTP43490 491 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 MCM2P49736 904 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 GIT2Q14161 759 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 IL17AQ16552 155 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 COLGALT2Q8IYK4 626 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 TMEM87AQ8NBN3 555 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 MUTYHQ9UIF7 546 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 PRG3Q9Y2Y8 225 aaPredicted RBP25.44■■□□□ 1.66
COL9A3-213ENST00000489045 STK24Q9Y6E0 443 aa25.44■■□□□ 1.66
COL9A3-213ENST00000489045 TTLL13PA6NNM8 815 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 LOC730098B7Z3J9 87 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 H3BQV1 296 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 PRPHP41219 470 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 OR1G1P47890 313 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 DSC1Q08554 894 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 CBX2Q14781 532 aaPredicted RBP25.43■■□□□ 1.66
COL9A3-213ENST00000489045 PTPN14Q15678 1187 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 FAM187BQ17R55 369 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 RILPL1Q5EBL4 403 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 DEPTORQ8TB45 409 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 POLD4Q9HCU8 107 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 MARCH5Q9NX47 278 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 STK39Q9UEW8 545 aa25.43■■□□□ 1.66
COL9A3-213ENST00000489045 SSBP05455 408 aaKnown RBP eCLIP25.42■■□□□ 1.66
COL9A3-213ENST00000489045 PRKCBP05771 671 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 PPP2R5AQ15172 486 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 TPRNQ4KMQ1 711 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 DTHD1Q6ZMT9 781 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 RPGRIP1Q96KN7 1286 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 CCDC113Q9H0I3 377 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 PDZD7Q9H5P4 517 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 PARP2Q9UGN5 583 aa25.42■■□□□ 1.66
COL9A3-213ENST00000489045 E9PMD0 336 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 LIG1P18858 919 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 CDC25AP30304 524 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 PRPF4BQ13523 1007 aaKnown RBP25.41■■□□□ 1.66
COL9A3-213ENST00000489045 MAPK6Q16659 721 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 TMEM132AQ24JP5 1023 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 HERC4Q5GLZ8 1057 aaPredicted RBP25.41■■□□□ 1.66
COL9A3-213ENST00000489045 KRT79Q5XKE5 535 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 IFT74Q96LB3 600 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms